Polyodon spathula (Mississippi paddlefish): 121324388
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Entry
121324388 CDS
T07273
Symbol
cdan1
Name
(RefSeq) codanin-1 isoform X1
KO
K19531
codanin-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121324388 (cdan1)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
121324388 (cdan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
TINF2_N
Motif
Other DBs
NCBI-GeneID:
121324388
NCBI-ProteinID:
XP_041122099
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All DBs
Position
12:complement(18800628..18846893)
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AA seq
1273 aa
AA seq
DB search
MAALLESVLLEEVEASRVVSWIKNVQLENGSCDSLAQFSVLRRDFVPFLLNFLREQASQI
LANGPSTPAKTPSSKGLRTPGYPSDRSGVSQSGHAPLKGASRVQLFSPPPCSPAQPEFDT
PGSQYLSGVTSLSSPSFTASPAARRSDQRASLGEFLPSSPDLQPPQRRGRRRSGGPSSSG
GRQPGREAGRGLNEETGRWDRGGRTETSITPPPPQLNINNLEDFPPVGAIPTPAGSKTKP
SRRINPTPVSAERPRSKPKNCFTSTPLSQPPPSPTIPESLRAATDCWLQEEREMLRRERS
KLSQQTSSPGLPPALEPSTPTKLGSSRTSSSGSADLHSPTADLHKVSSACQLDLLAELHC
ACIAENLVPNVFLELFFVLQLLTSRGSAPSEERQGCPAACRDVLDRPYFNSVHNCVYFAV
KVLERHFDLISQLDKCTLRLLAENERLGSFSPALRDRLLTAHDSSSAKVSRITPSFIQSV
PFQPATDNRSNFYSDKAFHIFKKQRDIFYELLREWEDFHKEPGWVFDVVLGSRIRGMVSQ
LTAASNHSHFARLFQKQLIQMCKEMGGEAPDLDVLGMLGADNLSRLKRLQERFIQPQSIM
GPCPPPSFPGHQEFFRDFLLAAGSYQLNQHLMDSLCQQILELDSICILGPGSSKEEGEGD
VEQQGEKQRFCSVLMTARLLAKFLGFIVFLPYQTREPPARGVQEAAIGVRNKSAPVLDVC
EVLRQSMVKQRTVLTVPWLVEFLSMVDHTAPYLLHYRRVFTLLLQLYRRTLLGRDRAGSF
LNQLLVVAVLGWLFQVPTVPEDLFFSGDFRDETDVIETPAPTQGLDCLPLVDQQLLYICC
PYLSEFRKLLAAFVAGSAAKNGGLIRKITPTAAEPLESPAPISQQKLQAELEQAFFHNQP
PSLRRTVEFVAERVGSNSVKHIKATLVSELVQSGEAQLRGKLRDEKASVARLFDTVCTQL
CERGRQALSRAREFCSVKSPEAVRILLPEETSAAVLSTAEDIAVRLATDKACTWLSANIA
ALIKRELKTAFDRMMKSLPSPPVSALSEGETPREHREPTASSLEKRGASCPPDCEHKATL
PSDLIIEIKEVLSVTLGPRSQEERVGFQQLQDLLQRLGETLCCRKFIFPVPEQMLARCSV
GLACVLVSGQLPLGQPELPAEESSVGGSPVRTLLNQLLGLWTHVFRTPVPLQLLFTDKQL
ASVLESGHTQWEEFLFLVSELQGRGLLGAEEVQSSWKNLSALSWPTDFMEQINRAACRLQ
QEQYQGVLLQNSD
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcttttggaatcggtgctgctggaggaggtggaggcgagtcgggtcgtgagc
tggatcaaaaatgtgcagctggagaatggcagctgtgacagcctggctcagttttctgtg
ctccggagagattttgtcccattcctgctcaacttcctccgcgagcaagcaagccagatc
ttggccaatgggccttccaccccagccaagacccccagctccaagggactgaggaccccc
gggtaccccagcgatcggagtggagtctctcagagtggccatgcgcccctgaaaggagcc
agccgggtgcagctgttctcgccacccccttgcagtcctgcgcagcctgagtttgacacg
ccaggctcccagtatctcagcggggtcacctctttgagcagccccagcttcacggccagc
cctgcagccaggaggtctgaccagagagccagcctgggagaattccttccctcctccccg
gacctccagcctcctcagcgccgcggcaggagacggagcggcggtccgtccagcagtgga
ggccggcagccaggcagggaggcgggacgcgggcttaatgaggagacggggcgctgggac
aggggaggcaggactgagacctccatcaccccccctccaccccagctcaacatcaacaac
ctggaggacttccctcctgtgggggccatccctacaccagctggaagcaagacgaagcca
tcgcgacggatcaacccgacaccggtgagtgcagagcgaccccgttctaaaccaaagaac
tgcttcacctccaccccgctgagccagccacccccctcccccaccatcccagagtccctg
agggcagcgacggactgctggctgcaggaggagcgggagatgctgcgcagagagagatcc
aagctgtcccagcagaccagctctccaggactcccccctgcccttgaacccagcacccct
accaagctgggctccagcagaaccagctccagtgggtcggcggacctccactctcccacc
gcggatttgcacaaagtctcctccgcctgccagctggacctgttagctgagctgcactgc
gcctgcatcgcggagaatctggtgcccaatgtcttcctggagctcttcttcgtgcttcag
ctgctgacgtcccgcggatcggctccttctgaggagcggcaagggtgtccggcagcctgc
agggatgtgttggacaggccctactttaacagcgtgcacaactgtgtgtactttgcagtc
aaggtcctggaaaggcattttgatcttatctcccagctggataaatgcacactgcggctc
cttgctgagaatgagagactgggctccttctctccagcgctgcgagatcggctgctcact
gcccatgacagcagctctgccaaggtgtcccgaataacaccatccttcattcagtctgtt
ccgttccagccagccacggacaaccggtccaacttctatagcgacaaagcgtttcacatc
ttcaagaagcagagagatattttctatgagctgctgagagagtgggaggacttccacaag
gagccgggctgggtgttcgacgtggtgctgggcagcagaatcagggggatggtgagtcag
ctgactgcagccagcaatcacagtcactttgccaggcttttccagaagcagctcatccag
atgtgcaaggaaatgggtggagaggcgcctgacctggatgtactcggcatgctgggagcg
gacaacctgagccgtctaaagagactgcaggagcgcttcatccagccccagagcattatg
ggaccatgccccccaccctccttcccagggcatcaggaattcttccgggatttcctcctg
gcagctggcagctaccagctgaaccagcacctgatggacagcctgtgccagcagatcctg
gagcttgactccatttgtatcctggggcctggcagcagcaaggaggagggtgagggtgat
gtggagcagcagggtgagaagcagcgattctgctcagtgctgatgacggctcgcctcctt
gccaagttcctgggtttcatcgtcttcctgccgtaccagaccagggagccaccagccagg
ggtgtgcaggaggcagccatcggggtccgcaacaagagtgctccagtgcttgatgtttgt
gaggtgctgaggcagtccatggtgaagcagcgcacggtgctcacggttccctggctggtc
gagtttctctccatggtggatcacactgccccgtacctactgcactacaggagggtcttc
acacttctgctgcagctgtacaggcgcaccttgctggggagggacagagcggggagcttc
ctgaaccagctgctggttgttgctgtgctgggctggctcttccaggtcccaactgttcct
gaggatctgttctttagtggggatttcagagatgaaactgatgtcattgaaacaccagct
cccactcaaggactggattgtctccccctggtggaccagcagttgctttacatctgttgc
ccatatcttagcgagttccgcaaactgctagctgcgtttgtagcaggaagtgcagcgaag
aacgggggcttgatccgcaaaataacaccaaccgccgcagagccactggagtctcccgcc
ccaatatcccaacagaaactacaggcggagttggagcaggcgttctttcacaaccaaccc
ccgtcactgcgccgtaccgtggagttcgtagcagagagagtcgggtcaaattctgtcaaa
cacatcaaagccacgctggtctcggagctggtgcagtccggagaggctcagctgcgagga
aagctgagggatgagaaggcgagcgtggccaggctctttgacaccgtgtgcacccagctg
tgtgagaggggcaggcaagcactcagcagagccagagagttttgcagtgtgaagagccct
gaagctgtcaggattttgcttcctgaagagacctctgcagcagttctgagcacagcggag
gacattgcagtcaggttagccaccgacaaggcgtgcacctggctctctgctaatatcgca
gccctgattaagcgggagttgaagacggccttcgaccggatgatgaaatccctgccgtcg
cctcctgtcagtgccttgtccgagggggagaccccgagagagcaccgtgaacccacagcg
agcagcctggagaagaggggggccagctgcccccctgactgtgagcacaaagccacactg
ccctccgacctcatcattgagatcaaggaggtgctgagtgtgacgctggggcctcggtcc
caggaggagagggtcggtttccagcagctccaggaccttctgcaaagactgggggagacg
ctgtgctgcaggaagttcatttttccagttccagagcaaatgttggccagatgctccgtc
ggactggcttgtgtgttggtgtcaggccagctgcctctcggtcaacctgagctccctgcg
gaggagagcagtgtcggggggagtccggtccgcaccctgctgaatcagctcctgggactg
tggacacacgtcttccgcactcccgtccctctgcagctgctcttcactgacaaacagctg
gcttccgtcctggagtctggacacacacagtgggaggagttcctgtttcttgtcagcgag
ctgcaaggaagaggactgctgggggcagaggaggtgcagagcagctggaaaaacctgtct
gcactgtcctggcccacggacttcatggaacaaatcaacagggcagcctgcagacttcag
caggagcaataccagggcgtgctgctgcagaacagtgactaa
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