Polyodon spathula (Mississippi paddlefish): 121324395
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Entry
121324395 CDS
T07273
Name
(RefSeq) F-box/WD repeat-containing protein 11 isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04114
Oocyte meiosis
pspa04120
Ubiquitin mediated proteolysis
pspa04218
Cellular senescence
pspa04310
Wnt signaling pathway
pspa04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121324395
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121324395
04340 Hedgehog signaling pathway
121324395
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
121324395
04218 Cellular senescence
121324395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121324395
03036 Chromosome and associated proteins [BR:
pspa03036
]
121324395
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121324395
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
121324395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
F-box
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_VPS8
PEP5_VPS11_N
WD40_2
DUF1513
DUF4508
Motif
Other DBs
NCBI-GeneID:
121324395
NCBI-ProteinID:
XP_041122119
LinkDB
All DBs
Position
12:30264954..30291667
Genome browser
AA seq
565 aa
AA seq
DB search
MEPEIEDKTLELMCSVPRSLWLGCSHLAESMCALRCLQSMPSVRCLQNTSVMEAQNEDDS
LKKSTVFQISNGPSSVIVSRKRPSEGNYEKEKDVCIKFFDQWSESDQVEFVEHLISHMCH
YQHGHINTYLKPMLQRDFITALPAQGLDHIAENILSFLDARSLCAAELVCKEWQRVISEG
MLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTTEIPPNSYYRSLYPKIIQDIETIEA
NWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQTLECLKILTGHTG
SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRS
IAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNG
HKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAY
DGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLN
VASSMTPNGQNEGRSPSRTYTYISR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgagatcgaggataaaaccctggagttaatgtgttctgtgcccaggtctttg
tggctaggctgctcccacctggcagagagcatgtgtgcactgaggtgcctgcagagcatg
cccagtgtccgatgtcttcagaatacttctgtgatggaggcacagaatgaagacgactcc
ctcaaaaagagcacagtattccagataagtaacggtccctcctctgtgattgtgtcacgg
aaacggccctcggaggggaactacgagaaggagaaggacgtctgcatcaaatttttcgac
cagtggtcagagtcggaccaggtggagtttgtggagcacctcatctcccacatgtgccac
taccagcatggacacataaacacctatctgaaacccatgctgcagcgggacttcatcact
gccctgccagcccagggcctggatcacattgcggagaacatcctgtcgttcctggatgct
cgatcactgtgtgcagcagagctggtgtgtaaagagtggcagcgcgtcatctcggagggt
atgctgtggaagaagctcattgagaggatggtgcgcactgacccgctgtggaaggggctg
tctgagaggcaccagtgggagaagtaccttttcaaaaacagaacgactgagatcccacca
aactcttactacaggtcgctgtacccaaagatcattcaggatattgagacgatcgaagca
aactggcggtgtggacgccacaacctgcagcggatccagtgccgctctgagaacagcaaa
ggggtgtactgcctgcagtacgatgatgacaagatcatcagtggcctgagggataactcc
atcaagatctgggacaagcagaccctggagtgtctgaagatcctgacaggccacacgggc
tctgtgctgtgtctgcagtatgatgagagagtcattgttacaggctcctcagattccaca
gtgcgggtgtgggatgtaaacactggggaggttctcaacacgctgatccaccacaatgaa
gcagtgcttcatctgcgcttttgtaatgggctgatggtgacctgctccaaggaccggtcg
atcgcggtgtgggacatggcctcccctactgacatcagcctgcgcagagtcctggtgggc
caccgtgcggcagtcaacgttgttgactttgacgacaaatacatagtctctgcctctggg
gaccggaccataaaggtgtggagcacaagcacttgtgaatttgtgcgcactctgaacgga
cacaagcgcggcattgcatgtcttcagtaccgggaccggctggtggtgagcggttcatcg
gacaacacaatccggctatgggacattgagtgtggcgcctgtctgcgagttctggagggt
catgaggagctggtccgctgtatccgatttgacaacaagaggatagtcagcggagcctat
gatggaaaaattaaggtgtgggacctgcaggctgctctggatccccgtgccccagccagc
actctttgtctgcgcacccttgtggagcattctggccgggtcttcaggctgcagtttgac
gagttccagatcatcagtagttctcatgatgacacaatcctgatctgggacttcctcaat
gtggcatcaagcatgactcccaacgggcagaacgaggggcgctctccgtcccgcacctat
acctacatctccagataa
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