Polyodon spathula (Mississippi paddlefish): 121324398
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Entry
121324398 CDS
T07273
Name
(RefSeq) centrosomal protein of 170 kDa protein B-like isoform X1
KO
K16463
centrosomal protein CEP170
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121324398
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
121324398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP170_C
FHA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
121324398
NCBI-ProteinID:
XP_041122160
LinkDB
All DBs
Position
12:complement(14538717..14589870)
Genome browser
AA seq
1718 aa
AA seq
DB search
MSVTSWFLVSSCGTRHRLPREMIFVGREDCELMLQSRSVDKQHAVINYDLATDEHLVKDL
GSLNGTFVNDLRIPDQTYITLKLNDVIRFGYDAHVYLLERSQHRVPEEALRHEKYTSQLQ
MNIKAPDKKKAEQTGETEGGTESPRAKMEKGDPKGLPETTTSRPTPLYGQPSWWGEDDAG
NKVPPADGTLPEEIQSEGPKETARLDPEINGTIADYQDSQGKSVYSYHREPSYFEIPTKE
FQQHHHKSPEAEVHEIPTKDTDTTTSPVPATTPPVVQSHASFTIEFDSCTPGKIKIRDHV
TKFSLRQRQFGKDLAAASTEMMSAESKVADWLVHNDPSMMRKKPPCDDVYSTKSDLPVYI
KTLQVNRHEDGTQSDSEDPILSEKPKKQATPEEEPLHSPPESHSSLQSQTKLETQESLNQ
QAFVIEFLDDTPRKKRSQSFTHNSVNGDSYSALKAKLEKRKVAAATMQHTSGPVKSAAGP
QRSSSLKREKTEDHLSSGSSLFSSRTPVTVKPFGSVGKKSKLAQDFAAEFLKAQSATALA
MATPSPEKPIPQPVSAPPVMESAPPQIPTPPHSQPVSPFLTVAPLAAPLAFPRAVRALDI
KPGKLGRNEEDDSLSDAGTYTIETETQDKEVAEARNMIDQVFGVLDSPEYTGVYRPVINN
DREEHNSYRHRKSSTVDQKETPLQGYNPAVITGPQIEGSEQARHIGPVPPGGPKWVSRWA
SLADSYGNSGPASGLDDLQQHGVVTDRGRRIGHPPVMSRSAEHTESDSTQSARTRRLLPQ
VPPAEKFESPTPSVVIRPDPYLSYEVPERGSGTPRQQESAQRLCVQDDLDPDSLSDASKS
DDGSAVQKNKKHRTGRGVDKTQPEKLWTDNTNVQRLEEKPAVTETRATSFYIGSEETPSK
QTSGHGHTVSRAKREPEVSSKPASSTVFGKHLAHLDAKETGKQSVLVHSQEKEAVPAKES
STSFVRQESFTKDRPSDDIPVNKLPHISSHPALKDLDVRHAYGTDCSQDTQVFLKDTENA
LAALEAKFHSHGPHRSQKSESSVTQMEDSLSGESDVDTASTVSHVSSKKNTVSAMPQKRY
INSLQKEKSSSTPSIQDQYGQTSARERLSEKRRTQVSEGGTKADSTKRFQLRRSTGNRGS
LDFTEEVRSTSLPYWPDSFSSDHESSSRPTMRKKLIAQPQKEDPSKVPKSVLYQTLTRSN
SLSAPRPTRASMLRRARLGEASDNESTETDRMSLNSDASGPSKPQADSKKLSRLDLLAMP
RKRTGSFTMPSDTETSTPRSGFSNRSMEFSNSVRKSVAAEAKPTAKKTPGAGVKQPVSRG
RSSSARYSSATSSSRRRQKGSDYISTSDEEYESSHTSPKHKRSHASTATQTSRAQAVERR
KVQSRETEEEEEGEEADPYQHWSSHSAEIAKLSQDLAKDLAILAREIHDVAGDGDSQSSS
GTGPSTSLSSAPNTPASTMSAREETALPSSQATLSSQLVQHIPEASLNFQKVPPGSTGLK
KELDQNMNDHDLKRRSWSREEVILDNLMLNPVSQLSQAIRENTEQLAEKMKILFQNRTGN
WEDIEAKMYSENEVPILKTSNKEITSILKELRRVQKQLEVINTIIDPSGNTDLGSRAFSI
GAPPASARCRTDHSGSAPRDSRSPAQRGSCPSSNANTRGKREANYHCGQHIFSIEASLES
GSLTNPVEDRYCSAISMLFFHSLLRNKKLKKRKACNPK
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgacatcatggttcctggtcagcagctgtggcactcggcaccgcctccctcga
gagatgatcttcgtgggccgggaggactgtgaactcatgctgcagtcccgcagtgtcgac
aagcagcatgcggtaatcaactatgacttggccacagatgagcatcttgtgaaggacctg
ggaagcctgaatgggacctttgtgaacgatttaagaattccagaccagacctacataacc
ctaaaactgaacgatgtgatacggtttggatatgatgcacatgtttatttgctggaaagg
agtcaacacagagttcctgaagaggcgttaaggcacgagaagtacactagccagcttcaa
atgaacatcaaggcccctgataagaagaaagcagagcagactggtgaaacggagggcggg
acggagtcccccagggctaaaatggagaagggggaccccaaaggactgccagagactacc
acatcccggcccacgcctctctatggccagccatcgtggtggggagaagacgacgctgga
aacaaagtgccgccagcagatgggacactaccagaggaaatacagtccgagggcccaaaa
gagacagccagacttgacccagaaatcaatgggaccattgcagattaccaggactcccag
ggtaagtctgtctactcctaccaccgtgagcccagctacttcgaaatccccaccaaggag
ttccagcagcaccaccacaagtccccagaggccgaggtgcacgagatccccaccaaggac
accgacaccaccacctcccctgtcccagccactacgccccctgtcgtccagagccacgcc
tcgttcaccatcgagtttgacagttgcacccccggcaagataaagatcagggaccacgtc
accaagttctccttgcgccagcggcagtttggcaaggacctggcggcagcctccaccgag
atgatgtcagcggagagcaaggtggccgactggctggtccacaacgaccccagcatgatg
aggaagaagcccccctgcgacgatgtgtacagcaccaagagcgacctgcccgtttacatc
aagacgcttcaagtcaacagacatgaagacgggacccagagtgactcggaggaccccatc
ctgtcagagaagcccaaaaagcaggccactcccgaggaggaaccgcttcattcgcccccc
gagtctcactcttctctccagagccaaaccaaactggaaacccaggagtcgctcaaccag
caggccttcgtcatagagttcttggatgacactccccgcaagaagaggtcgcagtcgttc
acccacaattccgtgaatggtgattcctactccgccctcaaagccaagctggaaaaacgc
aaagtggccgcagccacgatgcaacacacgagcgggccagtgaagagcgctgcaggcccc
caaaggtccagctcactcaaacgggagaagacagaagaccatctcagctcgggctcctcc
ttgttctcgtcgcgaacgccggtgacagtgaagccctttggcagcgtggggaagaagtcc
aagctggcccaggactttgcggcagagttcttgaaagctcaaagtgccaccgctctggcc
atggctaccccctcccctgaaaaaccaatccctcagcctgtatctgctcctccagtgatg
gagtctgctcctccccaaattccaactccccctcactctcagcctgtctccccgtttttg
acggttgcacccctggctgcccctcttgcatttccccgtgcagtccgggccctggacata
aaaccaggaaaactgggccggaacgaggaggatgacagtctgagtgacgcagggacctac
accatcgaaacggaaacacaggacaaagaggtggcggaagctcggaacatgatcgaccag
gtgtttggtgttctcgactcccctgagtacactggagtatataggcctgtgattaataat
gacagggaagaacataatagctatcgtcatagaaaaagtagtactgtggatcaaaaggaa
actccattgcaggggtataacccagcagtcattactggcccacagattgaaggcagcgaa
caggctcgacacatagggccggttcctccaggagggccgaagtgggtatccaggtgggcc
agtctggcagacagctatggcaactctggacccgccagcggcttggatgatctgcagcag
cacggggttgttacagacagaggtaggagaatcggtcacccgcccgtaatgagtaggagc
gcagaacatacagaatcagacagtacccagtctgcaagaacaagacgactccttcctcaa
gttccacctgcagaaaagtttgaaagccccacacccagtgttgtaattcggccggaccct
tatctcagctacgaggttcctgaaagagggagtggaacaccgcggcagcaggaatcagcc
cagaggctgtgtgttcaggatgacctggatcctgacagcctgagcgatgcaagcaagtca
gatgatggttctgcagtgcagaagaataagaaacacagaactgggaggggcgttgacaaa
actcaaccagaaaagctgtggactgataacaccaatgttcagagactagaagaaaaacct
gcggtgacagaaacgagagccacctctttctacatcgggtctgaagagacgccttcaaag
cagacctctgggcatggccacactgtgtctcgagccaagagggagcccgaagtctcatcc
aagcctgccagttcaaccgtttttgggaaacatttggcacacctggatgccaaagaaaca
gggaaacagtctgtcttggtccattcgcaagagaaagaagctgtgcctgcaaaagaatct
tctacttcttttgtcagacaggaaagcttcaccaaagacagacctagcgatgatattcca
gtaaacaagctcccgcatatttctagccatccagctctgaaagatcttgatgttaggcac
gcctacggtacagactgcagccaggacacgcaggtgtttctcaaggacactgaaaatgca
ctagcagctttggaggcaaagttccattctcatggaccccaccgaagccagaaatctgaa
tcatccgtaacccagatggaagactctttgtctggtgaatctgatgttgacacagccagt
acagtcagccatgtcagcagcaaaaaaaacactgtcagcgccatgccgcaaaagaggtat
atcaacagtctccaaaaagagaagtcctcttcgacgccttccatacaggatcagtatggc
caaaccagcgctcgcgagagactctctgaaaagcgcaggacgcaagtgtcggagggaggg
accaaagcagactcgaccaagcggttccagctgaggcgtagcactgggaaccggggctcc
ttggactttacagaagaggtccgtagcaccagcctcccatactggccagattccttctct
tcggaccatgaatcgagttcccgtccaacaatgaggaagaagcttatcgcccagccccag
aaggaagaccctagcaaagtccccaagtccgtgctctaccagaccctcacccgttcaaac
agcttgtcagcacctaggcctaccagggcatccatgttgcgcagggcccgcctgggagag
gcttctgataacgagagtaccgaaaccgaccgcatgtctctgaactcggatgcctctggt
ccttccaaacctcaggcggacagcaagaaactctctcggctggacctcttggccatgccc
cggaagcgaacgggctccttcacaatgcccagcgacacagagacctccacgcccaggtct
ggcttctctaatcgtagtatggaattcagcaactcagttcgcaagtcagttgcagcggag
gccaagcccacagccaagaagactccaggggcaggggtaaagcagcctgtctccaggggc
cggtcgagcagtgctaggtattccagtgctacatccagctccagacggcgccagaagggc
tctgattatatctctacatcagacgaggagtatgagtccagtcatacttccccaaaacac
aaacgctcccatgcttcaacagccacacagacctccagggctcaggctgttgagaggcgc
aaagtgcagtccagagagactgaggaggaggaggagggtgaagaggctgacccctatcaa
cactggtcatcgcacagcgcagagatagcaaagctgagtcaggacttggctaaagacctg
gcgatcctggcccgggagatccatgacgtggctggagacggagactcccagagctcttcc
ggcactgggcccagtacctccctcagctctgcacccaacacccccgcatcaaccatgtca
gccagagaagagactgcattgccatcatcacaagcaaccctttcatcacagctggtccag
cacattcccgaagccagcttaaactttcagaaagtcccacctggttcaacagggctcaag
aaggaactcgaccaaaacatgaatgaccacgacttgaaacgtcgctcctggagtagagaa
gaggtcattttggacaacctgatgctaaaccctgtgtcgcaactctcccaagccattcga
gaaaacacagagcaattagcggagaagatgaagattctctttcagaacagaacaggaaac
tgggaggatattgaagcaaaaatgtattctgaaaacgaagtgccgattttgaagacgtca
aacaaggagatcacgtcgattctgaaggagctgagaagagttcagaagcagttagaagta
atcaacactatcattgaccccagcggaaacactgacctgggatccagagccttctcgatt
ggggctcccccagccagcgcaagatgcaggactgaccacagtgggagtgctcctcgggac
tccaggtctcctgcacagcgagggagctgcccgtcctcgaatgccaacaccaggggaaag
agggaggcaaattatcactgtgggcagcacatattcagcatagaggccagtttggagagc
ggtagcttgacaaatcctgtggaagacaggtattgtagtgccatatcaatgttatttttt
cattctttattaaggaacaagaaattaaaaaaacggaaagcatgcaatccaaagtga
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integrated database retrieval system
