Polyodon spathula (Mississippi paddlefish): 121324405
Help
Entry
121324405 CDS
T07273
Name
(RefSeq) matrin-3-like isoform X1
KO
K13213
matrin 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121324405
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121324405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
121324405
NCBI-ProteinID:
XP_041122171
LinkDB
All DBs
Position
12:complement(34837936..34850613)
Genome browser
AA seq
1156 aa
AA seq
DB search
MTDQSSGRVDSFDLGTSSDTSMQGQDACGSQSRKNVDKAMNLFTTLGLSPEDLDSLTHIP
EDQLTVETLPKIIMQLKAQRAEEGGTASKRSRDDRSSSREQPHRAPSKPSGVRKYGQLRK
GPSRSYERLDYDEGKGGDSDRYPEPSRGHYESEYSRRGPVSERSFMERRTGSPSISKIED
YHGIVPSTFPHVCTLCDFYVHASKSWSRHIDGSLHAHSRKLLLDQYPEWIPKSMQSRDRQ
DPLEVEAINGEVGHQRRGVSSDWNKGGGISSQDKRRYAMKAQRGGKVVVAKYLNGTCYLK
DLLELAEPFGTVANHLVVVNKTFLEMLSHEEAASMVKYYQRTTPMVRGHAVQMYLSSAIN
TIQTPGRVRAPMQSQDSGYAVVYICNLPPSEFKDSELIELAKRFGPVWNSLILKHEAFVE
MVNPRDAEMMVKYYTIHPPKLNGKKIKIITCKKYRRLKVKPGKASHRGKDSGSSRQANET
SGRRKRSRSRERVSTAKEEGGSSGKEEQEEPGDQGSELMDMESNAEEEEGVELGEEEDPE
EPDPFLDCTETQGEEPKEQSLESSEIQEEGQVEVSLVTSATQGEQVEKECLESLETQVEQ
PAEKSLESLETQEEETAEKPPEGPGSQGIEPAAKAPESLETQGLETADKSLERSKSQKEA
LGEEDSQAADEKAAEACFPEEEEGIPEFPDNLEDLVTLDEVGDEEEAEMTRLDSESAASS
SSSAQKEKEWGKMVNVSFSKKGYNLVKEILRLAEPFGKVVFYKILEQRNEAVLEMSTIEE
ARQMVDFYKIKPAMLYRASVKISLLKNFHGGRVVYFHQLPSSYFTIHSLLKLARRFGKVK
CYVLIWVRNEAFIEMETSRSALEMCREYKKNPPTLNGKMLSVYLSRKEKLLKGMRPPSIS
PSPEPPKRSKRERPERSKKEDETSRSSKSRTKEREEEDEEGPPQKRGRSQETGEQGESLV
KTREEEQKQSKDKVLLDKEAAGSQHENETVGMPSPSEGEADIPLTTDDASGETGLREGLQ
AVASAANKVSSQALHKQADKSESTEETLLRMVEPMETKIVHKGGGCDSANEQHTGTDKKT
VDSINPEPTPTTLGPYQPNNPVGVEQVKAGFYCNLCSLFYTSEEEAKVTHCSSLAHYRKL
QEMLNKENTAAESSSS
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccaaagcagcggcagggtggacagctttgatcttggaacaagttcagacaca
agcatgcaaggccaggatgcctgtggctcccaaagccgcaaaaacgtagacaaggccatg
aaccttttcaccacccttggcctctcgccagaagacttggattcgctgacgcacattccc
gaggatcagctcactgtggagacgctgccgaagattatcatgcagctgaaggcacagaga
gccgaggaagggggcaccgcatcgaagcgctctagggatgatcgctcgtcctcacgagaa
caaccgcacagagccccaagtaaaccttctggagtcaggaaatatggccagctaagaaag
ggtccctctcgcagctacgagcggcttgactacgatgaggggaagggaggcgacagtgac
cggtatcctgaaccatcccgtggtcactatgagtcagaatacagcaggaggggtcctgtg
tctgaaaggtcatttatggagaggaggacagggtccccgtctatcagcaagattgaggat
taccatggaattgtgcccagtacctttccacatgtgtgcaccctttgtgacttttatgtg
catgctagtaagtcctggagccgtcatatcgatgggtcactacatgcacatagtcggaag
ctcctcctggatcagtatccagaatggattcccaagagtatgcagagcagagacaggcag
gatcctcttgaggtggaagctatcaatggagaagttgggcatcagcggagaggagtaagc
tctgattggaacaagggtggagggatttcaagtcaagataagagacggtatgccatgaaa
gcacaaagaggaggaaaagtggtggttgcaaagtatctgaatggcacgtgttacctgaag
gatctgctggagctggcggagccttttggaactgtagctaatcacctggtggtagtgaac
aagaccttcctggaaatgctgtcacatgaagaagcagcttcaatggtgaaatactaccag
cgtacaacccccatggtccgtggtcacgcagtacaaatgtatttgtcttctgcaattaac
acgattcagacacctggtcgtgtacgagctccaatgcagagccaggactctggctatgca
gtggtctatatctgtaacctgcctccttcagagtttaaagactcagagttgatagaattg
gctaagcggtttggtcctgtgtggaactctctaattttaaaacacgaggcgtttgtggaa
atggtaaaccctagggatgcagaaatgatggtgaagtattatacaatacatcctcccaaa
ttgaatggcaaaaaaatcaaaataatcacttgcaagaagtacaggagactgaaggtgaaa
cctggcaaagcttcacatagggggaaggatagcggcagcagcaggcaggctaatgaaaca
tccggaagacgcaagcggtccagatccagggagagagtttccacagccaaagaggagggg
ggatcttcggggaaggaggagcaggaagagcctggagaccagggatcagagttgatggat
atggaaagcaatgccgaggaggaggaaggagtggagcttggggaagaggaagatccagag
gagcctgacccatttctggactgtactgaaacccaaggggaggaaccaaaggaacaatcc
ctggagagttcagagatccaggaagaagggcaagtggaggtgtccttagtaacttcagca
acccaaggggagcaagtagaaaaggaatgcctggaaagtttagaaacccaagtggagcag
cctgctgaaaaatcccttgaaagtttagaaactcaggaagaagaaactgcagaaaaacct
ccagaaggtccaggaagccaaggaatagaaccggcagctaaagccccagagagtttggag
actcagggattggaaacagcagataaatctttggagagatccaagagccaaaaggaggcc
ctaggggaggaagacagtcaggcagcagacgagaaggctgcggaggcctgttttcctgag
gaggaggaaggaatcccagagttccctgataacttggaggatttggttactttagatgag
gtgggagatgaggaggaggcagaaatgacaagactagattcggaatcggctgcttcgtct
tccagcagtgcacaaaaagagaaagagtgggggaagatggtcaatgttagtttctctaag
aaaggttacaatttggtcaaggaaattctccgcctggctgaaccatttgggaaagtggtg
ttctacaaaatattggaacaaaggaatgaggccgttttagaaatgtcaacaattgaggaa
gcgagacaaatggtggatttctacaaaatcaagccagctatgctttatagagccagcgtt
aaaatcagtctgttaaagaattttcatggcggacgagttgtctacttccaccaactgcct
tcctcgtactttacgatccactctctcttaaagcttgccagacggtttggcaaagtgaag
tgctatgtgttgatctgggtccgcaatgaggcatttattgaaatggaaacctctcgctct
gccttggaaatgtgccgggagtacaagaagaaccctccaacgttaaacggcaaaatgttg
tcagtttacctgtccaggaaggagaaactcctgaaagggatgagacccccttccatttcc
ccttcccctgaacctcctaaaagatccaagagggagaggccggagaggagcaagaaagag
gatgagacgtccaggagctctaagtccagaaccaaagaaagggaggaggaggacgaggag
gggcccccacagaaaagggggcgcagccaggagacaggggagcaaggagagtctctggtg
aagaccagggaggaggagcagaaacaaagcaaggacaaggtgctgttggataaggaggct
gcaggcagccaacatgaaaatgagacagttgggatgcccagccccagtgaaggggaggct
gacattccactcacaacagatgatgcaagtggtgaaacaggtcttcgagagggtctacaa
gctgtggcttctgcagctaacaaagtaagcagccaggcccttcataaacaagcggataag
agtgagagcacagaagagaccctgctgaggatggttgagcccatggagaccaagattgtt
cataaaggaggtggatgtgactctgcgaatgagcagcacactggtactgataagaagact
gtggacagcatcaatcctgagcccacacctaccaccctgggaccataccagcctaataat
cccgttggtgtggagcaagtgaaggctggtttctattgcaatctctgcagcctgttctac
accagtgaagaagaagcaaaagtcacccactgcagcagcctggcccattatcggaaactg
caggaaatgttaaataaagagaatacagcagcagaaagttcgtcaagctga
DBGET
integrated database retrieval system
