Polyodon spathula (Mississippi paddlefish): 121324412
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Entry
121324412 CDS
T07273
Name
(RefSeq) RING finger protein 44-like isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121324412
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121324412
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121324412
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
MJ0401
VPS18_RING_C
RING_XB3-XBAT31
zf-RING_16
zf-RING-like
zf-C3H2C3
FANCL_C
zinc_ribbon_16
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
121324412
NCBI-ProteinID:
XP_041122185
LinkDB
All DBs
Position
12:35974051..35992482
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AA seq
441 aa
AA seq
DB search
MRPWEIAVNRRPPTAPFNQRRFPGEPCNIPAHLRRSPPVRRQWGRRDRPLLHSSLHQDEN
FHHALFAQHQQQISLDESRPYSHTSIPPRMLHPAAHPPQQNPIMVDLHEQMHQGPIPISY
TVTTVTTHGFPIHAGQPIPGCSTQQLPACSVMFSGQHSLLCCLLPPPLIQACTMQHLPVS
YQAFPPLISSEHFILHPPPPVPPHQPPHLAPLSQFVPLQPQHPRMPLQRVENDVEMRGDQ
HPVGGFSYPPAHHPPAMPPSVPLQYLPHDPLHQELPFGVPYPHVLPRRVSGQRYRLQQPL
PPPPPPPPYYPSFLPYFLSMLPVPPTAVGPAISLDLDVDDVEMENYEALLNLAERLGEAK
PRGLTKADIEQLPSYRFNQENHQSEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWL
KTNRTCPICRADASEIHRDAE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatgggaaatcgcggtgaataggcggccacccactgcccccttcaatcagagg
agattcccaggggagccctgcaatatcccagcgcatctcaggaggagccctccagtgaga
cggcagtgggggcggcgagacagacccttgttgcacagctctttgcatcaggatgagaat
ttccaccacgccctgtttgcgcagcatcagcagcagatctctttagatgagtcaagaccg
tacagtcacaccagcatacccccacgaatgctgcaccctgctgcccacccgcctcagcag
aatcccatcatggtggacctccatgagcagatgcatcaggggccaatcccgatttcatac
acggttaccacggtgacgacccacggtttcccaatccacgccggccagcctatcccaggg
tgcagcactcagcagctcccagcatgctcggtaatgttcagcggacagcactctctgctc
tgctgtcttcttcctcctcccctgatccaagcctgcacaatgcagcatttgccagtatct
taccaagcctttccgcctctgatctccagcgaacattttatactgcacccccctccgcct
gtgccgccacaccaaccgcctcacctcgctcccctgagccagttcgtccctctgcagcca
cagcacccccgcatgcctttgcagagggtagagaacgacgtggagatgagaggggaccag
caccctgtgggggggttctcctacccccctgcccaccacccaccagcaatgcctccgtct
gtgcccctccagtacctccctcacgaccctcttcaccaggagctgcccttcggagtgcca
tatcctcacgtgctgccaagacgtgtgagtgggcagaggtaccggctacagcaacccctg
ccccctcccccaccccctccaccttactaccccagcttcctgccgtacttcctctcaatg
cttccggtgcctccgactgcagtaggacctgccatcagcctggacctagatgtggatgac
gtggagatggaaaactatgaggcgttgctgaacctcgctgagaggctgggagaggccaaa
cctcgtggactcaccaaagccgatatagagcagcttccatcctacaggttcaaccaagag
aaccaccagtctgaacaaactctgtgtgttgtgtgctttagcgattttgagtcaagacag
ctgctgcgagtcttgccttgcaaccacgagtttcacgcaaagtgtgttgacaaatggtta
aagaccaatcgcacttgtccaatctgtcgagccgacgcttcagaaatccacagagatgct
gagtga
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