KEGG   Polyodon spathula (Mississippi paddlefish): 121324467
Entry
121324467         CDS       T07273                                 
Name
(RefSeq) zinc finger matrin-type protein 2
  KO
K12848  U4/U6.U5 tri-snRNP component SNU23
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121324467
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pspa03041]
    121324467
Spliceosome [BR:pspa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    121324467
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    121324467
SSDB
Motif
Pfam: zf-met zf-C2H2_jaz zf-U1 SNRNP27 MG280 DUF4250 C2H2-zf_KIN17 Herpes_gp350_A zf-C2H2
Other DBs
NCBI-GeneID: 121324467
NCBI-ProteinID: XP_041122324
LinkDB
Position
12:27876299..27883896
AA seq 198 aa
MASGSGAKNDFRRKWDKDEYEELAQKRLTEEREKKDGKPFPPVKRELLRHRDYKVDLESK
LGKTIVITKTTPQAEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQ
VKKRFEANKKKIEEKQKEYDFEERMKELREEEEKAKAYKKEKQKEKKRKADEDLNFEEDD
EMAAVMGFSGFGSSKKGH
NT seq 597 nt   +upstreamnt  +downstreamnt
atggcgtccggcagtggggcaaaaaatgacttccgaaggaaatgggacaaagatgagtat
gaagagttagctcagaagcgcttgacagaagaaagagaaaagaaagatggcaaacctttc
cctcccgttaagcgggagcttttacggcacagggactacaaggtggacctggagtcgaag
cttgggaagaccattgttatcaccaaaactaccccccaggctgagatgggaggatattac
tgcaatgtctgtgattgtgtggttaaggattctattaactttttggatcatatcaatggc
aaaaaacatcagagaaacttgggtatgtcaatgagggtggaacgatcatctctggatcag
gtaaagaaaagatttgaggcaaacaagaagaagattgaggaaaaacaaaaagagtatgac
tttgaagaacgaatgaaggaactccgggaggaggaggagaaagcaaaggcatacaagaag
gaaaagcagaaagagaaaaagcgcaaggctgatgaagatctcaactttgaggaagatgat
gaaatggccgcagttatgggattctcaggatttggttcctcaaaaaaaggccactga

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