Polyodon spathula (Mississippi paddlefish): 121324481
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Entry
121324481 CDS
T07273
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121324481
04090 CD molecules [BR:
pspa04090
]
121324481
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121324481
CD molecules [BR:
pspa04090
]
Proteins
121324481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Vps52_CC
DUF3587
Motif
Other DBs
NCBI-GeneID:
121324481
NCBI-ProteinID:
XP_041122356
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All DBs
Position
1:94180044..94265952
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AA seq
896 aa
AA seq
DB search
MMGKAGLFLLMLWGCTLCGSQTSMQKSPQGTLDFGFVPSGVYETHAYFEPGPIGILFHMV
HAFLHVVQPNPYPHDLVTKVAQQKLSEVKQEYHKPENCVLALQAIYYEMGFIVCASLGVL
FVLFMPLVGLCFCMCRCCDNCGGEMHQRQKKNADCRRGFFVTLLFVTSLIISAGVLCAYA
ANQNLSTQLKGVRKLVDSNFRDLKTFVNDTPMQIAYLANQYNTAKNKVISDLDNIGPLLG
SRICAQMGKEVLPALDGALSLAGAMRETKQALENVSVSLEVLQEATNSLQVNLLNERARL
SNTLNDPACSAPGVSSTCRDIRRTLSQLSINANYSALPNVDTELSNVKNVLKTDLSNIIQ
KGYSTFNDTPDLVKNQTKNIVSAVPRIKSMLDAIGSNITSFSKQSPVQDILTNFTLYLSQ
SQSFVEDYYPVINQYDFYRWMGCIIVCCMVVLILAFNFLGLLCGTCGYNKHASPTTRGCI
SNTGGKLLMAGVGFSFMFSWVLMIIVVITFVVGGNVEKLVCEPFENRALFKILDTPYLMN
PNWKNLLPGFLYQNPEIDLTFEKLYSNCKDNKGIYAALQMDNIFNISEYLNASMYTRDVV
DVFEFVNVDLSDMVLLDANAKQNLLNFSNTGIVSINYEAYLAEINKGVTKVDLLSFAKDL
EDQAGKLPKGALENALKGHASSIRFIHGKQVVPLEQAMKYFKARSTLNQSVRLLQRTTSD
LPNKINHVIGALDAAQHLISSNGSLIITQETEKYMEMMIGYFKQYIDWVKNSIIMEVAAC
KPVANVVDTVEILTCSFVADSLNTFWFGLGCCTVFLIPSIIISVKLAKFFRRMDSEDVYD
DIETIPMKTMEIGNNGYHNEHLHGIPNPVMTSIPSYDSMTRFPRASAPPRQDGWGD
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcaaagcagggttgttcttactgatgctgtggggctgtactctttgtggaagc
caaacttcaatgcagaaatcgccacagggaactttggattttgggtttgtgccctctgga
gtttatgaaacacatgcatattttgaacctggacctataggaatcctttttcacatggta
cacgctttccttcatgtggtgcagcccaatccttatcctcacgatctcgtcacaaaggtg
gcacagcagaagttgagcgaagtgaaacaagagtatcataagccagaaaactgtgtactg
gcactccaggccatctactatgaaatgggtttcattgtatgcgcctccctgggagtgctt
tttgttctgttcatgcctcttgtggggctttgcttctgcatgtgtcgttgctgtgacaac
tgcggtggggagatgcatcagagacagaagaagaatgctgactgccggagaggcttcttc
gtaaccttactctttgtgacgtctctcataatctcggccggtgtgctgtgtgcgtacgca
gccaatcaaaatctatcgactcagctgaagggagtccggaagcttgtcgatagcaatttc
agggatctgaaaacctttgtaaacgacactccgatgcaaatcgcttacctggctaaccag
tacaacactgccaaaaacaaggtcatttctgacctagataatataggtcctttgcttggc
agtaggatttgtgcacagatgggaaaagaagttctccctgcactagatggggcactaagt
ttggctggagccatgagagaaactaaacaggctttggagaacgtgagtgtctcgctggag
gtgttgcaggaagcaaccaacagtctgcaggtgaatctgctcaacgaacgagcgaggctg
agcaacacactcaacgacccagcctgctctgcaccaggggtctccagtacctgccgtgac
atcagaagaacactgagtcagctcagcatcaacgcaaactacagtgcgttgcctaatgta
gacacagagttgtcaaatgtgaaaaatgttcttaagacagacttaagtaacatcattcaa
aagggatattcaacatttaacgacaccccagatctggtaaagaaccaaacgaagaatatt
gtgtcagcggttccccgcatcaagtccatgctggatgccattgggtctaacatcaccagc
ttctccaagcaaagccctgttcaggacattcttacaaatttcactctgtacctcagtcag
agccagtcgttcgtggaggactactaccctgtgattaaccagtatgatttctacaggtgg
atgggctgcatcatagtctgctgcatggtggttctcatccttgccttcaacttcctgggc
ctactgtgtggcacctgcgggtacaacaagcatgcctcccccaccaccaggggctgcatc
tccaacactggcggcaaactgctcatggcaggtgttgggttcagctttatgttctcctgg
gtgctgatgattattgtagtgatcactttcgtcgtgggaggaaatgtcgagaagctggtc
tgtgagcctttcgagaacagagctttatttaagattctggatactccctatttgatgaat
ccaaattggaagaacctcctgcctggcttcctctatcagaatcccgaaatagacctgacc
tttgaaaagctttatagtaactgcaaagataataaaggcatctatgcagcactacagatg
gataatattttcaacattagtgaatatttaaatgcaagcatgtataccagggatgtggtt
gacgtgtttgaatttgtaaatgtggatctgagtgatatggtcctactcgacgccaatgca
aaacagaatcttctgaatttcagtaatacaggcatagtgagcatcaactatgaggcctac
ttagcagagatcaataaaggtgttacaaaagtggacctgttgtcatttgctaaagaccta
gaagatcaggcaggcaagctgccaaagggagcgctggagaatgcattgaaaggtcatgca
agcagtattcgtttcattcatggtaaacaggtggtgccactggagcaagccatgaaatat
tttaaagcaaggagcactttaaatcagagcgtccggctgttgcagaggactacgtctgat
ctcccaaataaaattaatcatgttattggtgctcttgatgcagcacaacacctcatcagc
agcaatggatccttaattattacccaggaaaccgaaaaatacatggaaatgatgatcggc
tactttaagcaatacatagactgggtcaagaactctattataatggaagttgctgcttgc
aagcctgttgccaatgtagtagatacggttgagattctgacctgcagctttgtggcagat
tccttgaacactttctggtttggcctgggatgctgcacagtatttttgatcccaagtata
atcatttctgtgaagctagccaaattctttcgcagaatggactccgaggatgtgtatgat
gacattgagactatacccatgaaaactatggaaattggtaataatggttatcataatgaa
catttacatggtattccaaaccctgtaatgacaagcatcccttcctatgactctatgact
agattcccccgagcttctgctcccccaaggcaagatgggtggggcgactag
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