Polyodon spathula (Mississippi paddlefish): 121324486
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Entry
121324486 CDS
T07273
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1-like isoform X1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121324486
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121324486
04261 Adrenergic signaling in cardiomyocytes
121324486
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121324486
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121324486
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
DUF7157
Motif
Other DBs
NCBI-GeneID:
121324486
NCBI-ProteinID:
XP_041122363
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Position
12:complement(42830028..42870889)
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AA seq
667 aa
AA seq
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MVQNSSMSRRPSTPTQMDISENPNLQGKYAKRKSRFKRSDGSTSSDTTSNSFVRQGSADS
YTSRPSDSDVSLEEDREALRREAERQALAQLEKAKTKPVAFAVRTNVGYNSAPGDDVPVQ
GMGISFDAKDFLHIKEKYSNDWWIGRLVKEGCEVGFIPSPVKLENTRLLQEQRLRQNRLS
SSKSGGNSSSSLGDVATGTRRPTPPATGHVELSNVTFDIDALDLDAEEPGTEPLVNQPKT
SVSSVTSPQANAKRIPFFKKMEQVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALFDFL
KHRFDGRISITRVTADISLAKRSVLNNPSKHTIIERSSTRSSLDALAEVQSEIERIFELA
RTLQLVALDADTINHPSQLAKTSLAPIVVYIKIASPKVLQRLIKSRGKSQAKHLNVQMVA
ADKLAQCPPELFDIILDENQLEDACEHLSEYLEAFWKATHPPSSNPPNPLLNRTMATAAL
AASPAPVSNLQVQGPYLVHGEQPRLRDGPLSDRAGLREYQPDPGKLQHPYLCTVRTGRAG
GRGLSRQDTFDSETQGSRDSAYTEAGDSCMDIETDPYEEPETYRSAQHRHLHLGQQQRQA
SWEDEGAEPDQENLNRAHLHSQQGRAKARERQRERERYCQNLELQEPMMGRNRNEGVEEW
GRDVYIR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggtacagaatagcagcatgtccaggcggccttctactcccacgcagatggacatttct
gagaatcctaatttacaggggaagtatgccaaacgaaagagccgcttcaaacgctcggac
ggaagcacctcctccgacaccacctccaacagcttcgtgcggcagggatcggcggactcc
tacaccagccgtccctctgactcggacgtgtccctggaggaggaccgcgaggctctgagg
cgcgaggcggagcggcaggccctagcgcagctggagaaggccaagacgaagccagtggcg
tttgcggtgcgcaccaacgtggggtacaactccgcgcctggggacgacgtgccagtgcag
ggcatgggcatctccttcgatgccaaggacttccttcacatcaaagagaagtacagcaat
gactggtggatcggccggctggtgaaggagggctgtgaggtcggcttcatcccgagtccc
gtcaaactggagaacacgagactgctgcaggagcagaggctgaggcagaacaggctcagc
tccagcaaatctgggggaaactcaagctccagcctgggtgatgttgccacgggaacacgc
aggcccacgccccccgccacaggtcatgtcgagttgtctaatgtcacgttcgatatagac
gctctcgatctcgatgctgaggagccgggcaccgagcccctggtcaaccagcccaaaacc
agtgtgagcagcgtcacctccccccaagctaatgccaagcgcattcccttctttaagaag
atggagcaagtccctccctatgatgtggtgccttccatgagacccatcattctagtgggt
ccttctctcaagggatacgaggtcacagacatgatgcagaaggctctgtttgacttcctg
aaacacaggtttgacggcagaatatcaatcactcgggtgacagctgacatctctctggcg
aagcgctctgtgctcaacaacccgagcaagcacaccatcatcgagaggtccagcacgcgc
tccagcctggatgcactggcggaggtgcagagtgagattgagcggatctttgagctggcg
cggaccctgcagctcgtggctctcgatgccgacaccatcaaccacccctcccagctcgcc
aagacgtcactggcacccatcgtggtgtacatcaagatcgcctctcccaaggtgctgcag
aggctgatcaagtcccggggaaagtctcaggctaaacacctcaacgtgcagatggtagcg
gcagacaagctggcacagtgccctcctgagctgtttgacatcatcctggatgagaaccag
ttggaggacgcctgcgagcacctgtctgagtacctggaggcgttctggaaagccacgcac
cccccgagcagcaacccgcccaaccccctgctgaaccgcaccatggccaccgccgcgctg
gccgccagcccggcccccgtctccaacctgcaggtccagggcccctacctggtgcacggg
gaacagcctcggctccgagacgggcctctgtcggaccgggccgggctgcgggagtaccag
cccgacccaggcaagctgcagcatccctacctgtgcactgtgaggaccggccgggcgggg
ggcagggggctgtctcgccaggacaccttcgattcagagacccagggcagccgcgactca
gcctacaccgaggcaggggactcctgcatggacatagagacagacccctatgaggagcct
gagacctaccgcagcgctcagcacaggcacctccaccttggccagcagcagcgccaggcc
tcctgggaggacgagggggccgagccagaccaggagaacctgaaccgggcccacctgcac
agccagcagggccgggccaaggccagggagcggcagagggagagggagcggtactgccag
aacctggagctgcaggaacctatgatgggtcggaatcgcaatgagggggtggaggagtgg
gggagagatgtgtacatccgctag
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