Polyodon spathula (Mississippi paddlefish): 121324515
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Entry
121324515 CDS
T07273
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121324515 (gabra1)
04082 Neuroactive ligand signaling
121324515 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121324515 (gabra1)
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121324515 (gabra1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121324515
NCBI-ProteinID:
XP_041122430
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All DBs
Position
12:33014511..33035135
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AA seq
456 aa
AA seq
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MRRTAMFSHSTWACLLLLHVLSGKSHGQTPNLEEVKDNTTVFTRILDSLLDGYDNRLRPG
LGERITEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWRDERLKFKGPMTVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYIWTRGAAQSVVVADDGSRLNQYDLLGQTVDSGIVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKKKES
LIKKNNTYTASASNYAPNIARDPGLATIAKSAATTDSKEGEPKPKPPEAKKTFNSVSKID
RMSRICFPLLFGTFNLVYWATYLNREPAIKGLFQPH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaactgcaatgttcagtcacagcacatgggcctgtctgctgttattacatgtg
ctctctggaaaaagtcatggacagacacccaatcttgaagaggtaaaggacaacaccaca
gtgtttacaaggatcctggatagtcttttggatggatatgacaaccgtctgagaccaggg
cttggagagcgcataactgaagtgaagactgacatctttgtcacaagtattggtcctgtc
tcagaccatgacatggaatatacaattgatgtcttctttcgccaaagctggagagatgag
agattaaaattcaagggtccgatgacagttctccgtttaaacaaccttatggccagcaaa
atctggacgccagatacattcttccacaacgggaaaaaatctgtggctcataacatgaca
atgcccaataagctgctacgtatcacagaggacggaactcttctttacacaatgcgattg
actgtgagggcagaatgcccgatgcatttggaagacttccctatggatgctcatgcctgt
cctttgaagtttggcagctatgcctacactcgtgcagaggttgtatacatatggacacga
ggtgcagcacagtcagtagttgtagctgacgatggttcacgacttaaccagtatgatttg
ctggggcaaactgtcgactctgggattgtccagtccagcacaggagaatatgttgtcatg
actacacactttcatttaaagaggaagattggttacttcgtcattcagacctatttaccc
tgtataatgacagtgattctatcccaagtctcattttggctcaacagagaatctgttcct
gcaagaactgtatttggagtaaccaccgtgctgaccatgaccacactgagtatcagcgcc
aggaactctcttcccaaggtggcttatgccacagccatggactggttcattgcagtctgc
tatgcgtttgtgttctctgctctaattgagtttgctacagtgaattatttcacaaagaga
ggctacgcctgggatgggaaaagcgttgtgcctgaaaagccaaagaagaaaaaagaatct
ctcatcaagaaaaacaacacgtacacagcaagtgcatcaaactatgctccaaacattgcc
agagaccctggtttggcaaccattgcaaaaagtgctgctaccactgactctaaagaagga
gaaccaaaacccaagcctccagaagccaagaaaacctttaacagtgtgagcaaaattgac
cggatgtccagaatatgcttccctctgctctttggaacctttaatttagtctactgggca
acctatttaaatagggagccagcaatcaaagggttatttcaaccccactaa
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