Polyodon spathula (Mississippi paddlefish): 121324524
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Entry
121324524 CDS
T07273
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor 1-like
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121324524
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121324524
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pspa01001
]
121324524
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pspa04090
]
121324524
Enzymes [BR:
pspa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121324524
Protein kinases [BR:
pspa01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121324524
CD molecules [BR:
pspa04090
]
Proteins
121324524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
VEGFR1-3_N_Ig-like
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
121324524
NCBI-ProteinID:
XP_041122455
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All DBs
Position
12:complement(27424404..27453669)
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AA seq
956 aa
AA seq
DB search
MHRWVLTLAILHCTAAKGLNLPVINPNASEIVLDVGQQLSLHCEGNENVTWITRLAKHQK
LEKKYGKYSTFTTRATAEFTGTYKCAYQNHTDLFTSVHVYMKDPKIFFVSGTYNNHIMKP
EGVNVLLPCLLTDPGVTELSLRMENGSSVPSGMVYTGDRQSGITIKNVEPSFSGDYVCVA
MKNGVEKVSRTFSLIVYQKLRFPPYVSVERQEHVRIVGEKFGISCSTSNPNFNYNVTWKH
SAGKNFEVSEEAKYDGSQLSIMSIFEIPAVNMSDTGNITCIGMNEAGINSSTTYLQVVEE
GYMRLSPQHDTTLEVPEGEDLELKVLIEAYPALLESRWDTPRSHNVSVHKEEFHRFNNRY
ESVLKLNRMKTAERGQYTFYTGNANSNSSVTFHILIHQKPVASVRFQNTTNQLLCKASGY
PAPTIQWYQCPGIQERCTENDTGKIEELRGNIIILQTAPYGNIEVESSVTVGTFNERMTV
ECLASNFAGEDHASILTEVIERSYLVNDELFKLTLTASIAMAAFFLILLMILLYKYKQKP
RYEIRWKIIEASDGNNYTFIDPIQLPYNVKWEFPREKLRLGKILGAGAFGKVVEATAYGL
GKEDTVLRVAVKMLKPSAHWDEKEALMSELKILSHLGHHKNIVNLLGACTHGGPVLVITE
YCSYGDLLNLLRQKTKSFLANAVSEPILEESSDYKNLSIDKKYMRSDSGISSSSSDGYLQ
MKSSFTGSRSAQVSMCDEIQEDNWSLDMEDLLRFSYQVAQGLDFLAEKNCIHRDVAARNV
LLTDGRVAKICDFGLARDIMNDSSYVVKGNARLPVKWMAPESIFDCVYTSQSDVWSYGIL
LWEIFSLGKGPYPSMLVDSKFYKKVKDGYQMSRPDYAPPEIYTIMKMCWNLEPTKRPSFN
KIGQLIERLLGDQTKQDYENIQCATTNETEPCSDPKSCDQGEEAQPQLKTNNYQFC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtgggttttaaccttagcgattctgcattgcactgcagccaaaggtttgaac
ctaccagttattaacccaaatgcctcagaaatagtcctggatgtggggcagcagctgagc
cttcactgtgaggggaatgagaatgtgacctggatcacaagactggcaaaacaccagaaa
ctggagaagaaatatggaaaatacagcaccttcacaaccagagctacagcagaatttaca
ggcacctacaagtgtgcatatcagaaccacactgatctgtttacctctgtgcatgtttat
atgaaagatcccaagatcttctttgtatcagggacgtacaataatcacattatgaagcct
gaaggagtgaatgttctcttgccttgtctgttgactgatccgggagtcacagagttgtcc
ctcaggatggaaaatggtagttcagtcccaagtggaatggtgtacactggggatagacag
agcggtataaccataaaaaacgttgagcccagtttcagcggtgattatgtctgcgtagcc
atgaagaatggagttgagaaagtctcaaggacattctccctcattgtctatcagaagtta
cgtttcccaccatacgtatcggttgaacgtcaggagcatgtgcgcattgttggagagaag
tttggaatcagctgttccacaagtaacccaaactttaattacaatgtaacctggaaacat
tcagcaggcaagaattttgaagtgtcagaagaagcaaaatacgatggaagccagctgtct
ataatgagcatctttgaaatccctgctgtgaacatgtcagacacagggaatataacttgc
ataggcatgaatgaggcaggcatcaacagctccaccacatatttgcaagttgtagaggaa
ggctatatgaggctgtcaccccagcacgacaccactctagaggttcctgagggagaggat
ctggagctcaaggtgctgattgaagcctatcctgcactattggaatcaagatgggataca
ccaaggtcacacaatgtttcagttcataaagaagagtttcacagatttaacaacaggtat
gagtctgttctgaagctgaacaggatgaaaacagcagagagaggccagtacacattctac
acaggaaacgcaaactcaaactcatcagttacctttcacattctaatacaccagaagcct
gttgcttctgtacgctttcagaataccacaaaccagctgctctgcaaagcttctggttac
ccagcccccaccattcagtggtaccaatgtccaggaatccaagaacgctgcacagagaat
gacacaggaaagattgaggagctaaggggaaatattatcatcttgcaaacagccccctat
ggaaacattgaggttgagagctctgtgaccgtggggacattcaatgagaggatgactgtg
gaatgtctggcatcaaactttgcaggagaagatcatgcatcaattctgacagaagtcata
gaaaggtcctacttagtcaacgatgagctgttcaagctgactctcacagcttccatagct
atggcagctttcttcctgattcttctcatgatccttttatacaagtacaaacagaaaccc
aggtatgaaatccgttggaagatcattgaagcaagtgatgggaacaattatacattcatt
gacccaatccagcttccctacaatgtcaaatgggagttccccagggaaaagctacgccta
ggaaagatcctgggtgccggtgcattcggaaaggttgttgaggcaacagcctatggtctt
gggaaggaagacactgtgcttcgagtagcagtaaagatgcttaaaccgagtgcccattgg
gatgagaaggaggccctgatgtcagaactgaagatcctgagtcacctgggacatcataag
aacatagtaaatctgttgggagcctgtacacatggaggcccagtccttgttatcactgaa
tactgtagctatggagacctactgaatctcctcaggcaaaagacaaaaagttttctagcc
aatgcggtcagtgagcccatcctggaagagagcagtgactacaaaaacttgagcatcgac
aagaagtacatgagaagtgacagtggtatttcaagctcctcttcggatggttacttgcaa
atgaagtcaagttttactggttccagatctgctcaagtctccatgtgtgatgagatacag
gaggataactggtccctggacatggaggacctactcaggttctcctatcaagttgctcaa
ggtctggactttcttgctgagaagaattgtattcacagggatgtggccgcgagaaacgtc
ttgctaactgacggacgagttgctaagatctgtgacttcgggctggcgagagacatcatg
aacgactccagctatgtggtgaaaggaaatgcacgtctcccagtgaagtggatggcccca
gagagtatctttgactgtgtgtacacttctcagagcgacgtctggtcctacggcattcta
ctctgggagatcttctcattgggcaagggcccatatcccagtatgcttgtagacagcaag
ttttacaagaaggtaaaagatggatatcagatgtctagacctgattatgctcctcctgaa
atatacaccatcatgaaaatgtgctggaacttggagccaacaaaacgaccatctttcaac
aagatcgggcagctcattgaaagactgctgggagatcaaaccaagcaggactatgaaaac
atccagtgtgccaccactaatgaaactgaaccctgcagtgacccaaagtcatgtgaccaa
ggagaggaggcccagccccaactgaagacgaataactatcagttctgctaa
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