Polyodon spathula (Mississippi paddlefish): 121324526
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Entry
121324526 CDS
T07273
Name
(RefSeq) calcium permeable stress-gated cation channel 1-like isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121324526
Transporters [BR:
pspa02000
]
Other transporters
Pores ion channels [TC:
1
]
121324526
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
121324526
NCBI-ProteinID:
XP_041122459
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Position
12:complement(3304973..3342824)
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AA seq
846 aa
AA seq
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MEGSYFSAVPASGNERDTSLDFLSFLDTLGTDNGTVERCYSTRAHSSVLQGLPFGGVPTV
LAINFVLWLVLLLVFSCLRKAAWDYGRLALIMDNDRYVAWHRWNSYDLTSLFYGEPSEKE
KSPPPSESSPSDMETKDVGFCSWLSSIYHMRDEEIQSKCGIDATIYLSFQRHILVLMVIV
CALSIAVILPVNFSGNLLGDSPQHFGRTTIANVPAQDRFLWLHSVFALLYFIITVLCMAH
HSVQLEYKEDEKVARTLMITSIPKEISDTGLIVKHFHEAYPSCTVNDVQFCYDVRKLMKL
DAERRKAMKGRLYFTGKAQKEGKVMIKSHPCAQIFCCDACGFEQVDAEQYYSELEEKLTD
EFNAEKNRIALKRLDMAFITFQDERMTAVIVKDYGRTPCRRKLQQSSITTVVKSHQWGVQ
YAPAPTDIIWENLSVQGSRWWVRCVLLNVCLFILLFFLTTPAIIVNTMDKFNVTRPVESL
RNPLVTQFFPTLLLWAFSVFLPFIVYYSAFFESHWTRSSENQLTMHKCYFFLVFMVIILP
SLGLSSLDLFFRWLFDIHFLDEADIKFQCVFLPDNGAFFVNYVITSSLIGTAMELLRIPG
LVVYATRLCFAKSEAERIHVKRNQAYEFQFGLEYAWTMCIFAVSMTYSITCPIIVPFGLL
YMILKHLVDRYNIYYAYIPTKLNQRIHSAAISQVIIAPILCMFWLLFFSVLRLGPVRPIT
LFTFVALLFCIAVSLFGFCLKRLHPKKPTSYQMSDQQTEGVFNDNERSSVSSTPNSNVFV
ASVLQEPELGLTPMPSPAHQSYGTMENRIETPSNEEETRPEAFESELENRKYFSSGPLVD
SDIGYH
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctcttacttctctgctgtcccggcttctgggaatgagcgcgacacaagcctg
gacttcctgagtttcctggacaccctggggacggacaatgggacggtggagcggtgttac
agcacccgggcccacagctccgtcctgcagggcctgccattcgggggcgtgcccactgtc
ctcgccatcaactttgtcctctggctggtgctgctcctagtgttctcgtgcctgcggaaa
gcagcatgggattatggacggttggcattgataatggacaatgacagatatgtagcctgg
caccgctggaactcttacgacctcacatctctgttctatggagagccgagcgagaaggag
aaatcgcctcccccctctgaatccagtccctctgacatggagactaaagatgtgggcttc
tgttcttggctttcatcgatctatcacatgagagacgaagagattcagagtaaatgcgga
atagatgccactatctacctctcgttccagcggcacatcctggtcctcatggttattgtc
tgtgccctctccatcgccgtcatcctgcctgtaaacttctccgggaacctgctgggagac
agccctcagcattttggaaggacgactatagctaatgttcctgcacaggatcgcttcctg
tggctgcacagtgtttttgcgctgctgtattttattatcaccgtgctctgcatggcgcac
cactcagtgcagctggagtacaaagaggatgagaaggtggcgagaacgctgatgatcacg
tcaattcccaaggagatctccgacacggggctcatcgtgaagcacttccacgaagcttac
ccaagctgcacagtgaacgatgtgcagttctgttatgatgttcggaagctgatgaagctt
gatgctgaaaggcgcaaggcgatgaagggacggctgtacttcacagggaaggctcagaaa
gaagggaaggttatgatcaaaagccacccctgcgctcagatcttctgctgtgacgcctgt
gggtttgaacaggtggatgcagagcagtattacagcgagctggaagaaaagcttactgat
gagttcaatgctgagaagaaccgcattgcccttaaaagactggacatggccttcatcacc
tttcaggacgagaggatgactgcagtcattgtaaaggattacggccggactccgtgtcgc
aggaagttgcagcagtccagcataaccaccgttgtcaagtcccaccagtggggggtacag
tatgctccagcacccactgacatcatttgggagaatctgtccgtgcaaggctccaggtgg
tgggtgcgctgtgtcctcctcaacgtctgcctcttcatcctgctcttcttcctcaccact
ccggccatcatcgtcaacaccatggacaagttcaacgtgacccggcccgtcgagagcctc
aggaacccacttgtgacccagttctttccaacactgctgctgtgggcgttctcggtcttc
ctcccgttcatcgtttactactctgccttcttcgaatctcactggaccaggtcaagcgag
aatcagctaacaatgcataagtgctatttcttcttggtatttatggtgatcatcttgcct
tcgcttggtctctccagtttggatttgttttttcgatggctctttgacattcactttcta
gatgaagctgacataaaatttcagtgtgtgttcctgcctgataacggtgctttctttgtg
aactatgtgatcacatcgagtctgattggcacagccatggagctgctgagaatcccgggg
cttgttgtgtacgctactcggctgtgtttcgccaagtctgaagctgagcgcattcatgtg
aaaaggaaccaagcctatgagtttcagtttggcttggagtacgcctggacgatgtgcatt
ttcgcagtaagcatgacctacagcatcacctgccccatcatcgttccttttggactcctc
tacatgatcctgaagcacctggtggatcgctacaacatctactatgcttacatcccaaca
aagctaaaccagcgcattcactctgcagccatcagccaggtcatcatagctccaatcctc
tgcatgttctggctgctgttcttctcggtgctcagattaggaccagttcgtcccatcaca
ctgttcacctttgtggctctgctgttttgtatcgccgtctctctctttgggttctgtttg
aagagactccatccaaagaaacccacaagctaccagatgtcagatcagcagaccgaaggg
gttttcaacgacaacgaaagaagcagcgtgtcctcaaccccaaactcaaacgtttttgta
gcttcagtgcttcaggagcctgagctgggactcacacccatgccatcgccggcacaccag
agctacggcaccatggagaacaggatcgagacgcccagcaacgaagaggagacccgtcca
gaggcctttgaatcggaacttgagaaccggaagtacttctccagcggacccctggtcgac
agcgatattgggtaccattaa
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