Polyodon spathula (Mississippi paddlefish): 121324577
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Entry
121324577 CDS
T07273
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121324577
04147 Exosome [BR:
pspa04147
]
121324577
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121324577
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121324577
Exosomal proteins of other body fluids (saliva and urine)
121324577
Exosomal proteins of colorectal cancer cells
121324577
Exosomal proteins of melanoma cells
121324577
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CENP-F_leu_zip
DDE_Tnp_IS240
TPR_MLP1_2
COOH-NH2_lig
ATG16
EMP24_GP25L
ADIP
DUF1664
NPV_P10
Motif
Other DBs
NCBI-GeneID:
121324577
NCBI-ProteinID:
XP_041122565
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All DBs
Position
12:44863584..44868542
Genome browser
AA seq
444 aa
AA seq
DB search
MTSFSSHSYSSRGPARISSGSGAYGSSSFSQSGGGMSIGQKAMSMYGGSGAAYSRISSSS
GFRSYSSAGCFQLEDAIQGGFQADSKQTMVNLNDRLAIYLEKVRTLEASNATLERQIREW
SQNRSVVTNDYSAYNTTIDDLRAKIATALHVNAGIILHIDNAKLAADDFKVKYENELTMR
MSVEADIVGLKKLLDELTLSRSDLEMQLEGLKEELIYLKKNHEEELVTCHSQMSGQVQVE
VDAAPGVDLAKIIAEIREQYESLATKNRKDVEAWYQGKVEAVQQQVTEHTESLKGSKTEI
KDLNRTFQGLQIELQSLHTMKQSLEANLAETNSRYSAQLIHLQGVVTSLEAQLTQLRADT
EHSAEEYRLLLDIKTRLELEIAEYRRLLDGEDGRSSVQTSTLVKASSGSASSSTTTKVVT
IVEEVVGGKVVSSSATSKSLNKVY
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacctccttctccagccacagctactccagcaggggacctgcccggatctcctcaggc
tctggggcttacggctcatcttcgttctcccaaagcgggggtggcatgagcattggtcag
aaagccatgagcatgtacggaggttccggtgctgcatactcccgtatctccagctcttct
ggctttaggtcctactccagcgctgggtgcttccaacttgaagatgccatccagggtggc
tttcaggctgacagcaagcagaccatggtaaacctcaatgaccgcctggccatctacctg
gagaaggtgcgtacactggaggcctccaatgccaccctggagaggcagatccgcgagtgg
agccagaatcgctccgttgtcaccaatgactatagcgcctacaacaccaccattgacgat
ctccgtgccaagattgcgactgcacttcatgtcaatgctgggatcattcttcacattgat
aatgccaagctggcagctgatgacttcaaagtcaagtatgagaatgagttgacaatgagg
atgtcagtcgaggctgacatcgtcggactgaagaagctcctggacgagttgactctgtct
aggtctgacctggagatgcagcttgagggtctgaaggaggagcttatctacctcaagaag
aaccatgaggaggaactggtcacctgccattcccagatgagtgggcaggttcaagtggag
gtggacgctgccccaggagtggatctggccaagattattgctgaaatcagagaacagtac
gaaagcctggccaccaagaaccgcaaagatgttgaggcctggtaccagggcaaggttgag
gctgtgcagcaacaggtgaccgaacacaccgaatccctaaaaggcagtaagacggagatc
aaagacctgaatcgtacctttcagggcttgcagatcgagctgcagtcgctccacaccatg
aagcagagcctggaagccaacctcgcagagaccaactctcgctactctgcccagctcatc
cacctgcagggtgtcgttaccagtctggaagcccagctgacacagctgagggccgacacg
gagcacagcgcagaggagtaccggctccttctggacatcaagacccgtctggagttggag
attgctgagtacaggcgcctgctggacggagaggatggcagatcctctgtccagacctct
actttggttaaagcttccagcggctctgcttcttccagcaccactactaaagtggtgacc
atcgtggaagaggtggttggtgggaaagtggtatcctcttctgctacttcgaaatccttg
aacaaggtatactga
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