Polyodon spathula (Mississippi paddlefish): 121324591
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Entry
121324591 CDS
T07273
Name
(RefSeq) ATP-dependent RNA helicase DDX24-like
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121324591
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121324591
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
Helicases
121324591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
DsrH
DUF4663
Motif
Other DBs
NCBI-GeneID:
121324591
NCBI-ProteinID:
XP_041122592
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All DBs
Position
12:complement(12006885..12014372)
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AA seq
822 aa
AA seq
DB search
MKIKKSKQKTFRSPAKSKRGIQVKGTWTPVEMDASLFSEEDMGGLVCFEELTDYSLFSSN
AMEKVAKKRKADDGEDSDNQVSEDDTGESQQTAKKKKKKNVKKKKQLAESTDDATFDSND
DAQDSKVLSDTQEVSLDEPVDSGEEDTVEPEKVTKKKKKKNKRQKKSTTNPNVAQQPKSK
KKVENWTNAGPFRSSGQDCDVSAWKDLFVPEPVLKALGSLGFNAPTPIQALALPPAIRDK
MDILGAAETGSGKTLSFGIPMIHMILEWRKARDAQSKEALDSQDNPTEETDEDDQVIPSG
LKEPSDQPDIAVLTEEEDVQGEEDSEVEEDSQQTGCVKVIENVEFDFETTETTDKSAKTK
DLFEKNPLLGLVLTPTRELAVQVKHHIDAIAKFTGIKTAIVVGGMAPQKQGRVLNRRPEI
VIATPGRLWELIRERHPHLSNLKRLRCLVIDEADRMVEKGHFAELSQLLEMLNDTEFNPK
RQNFVFSATLTMVHEAPTRILQKKKGKKIDKESKLETLMGKVGIKSKPKIIDLTRKEATV
ESLTETRIHCDTDEKDFYLYYFLLQYPARTMVFANSIDCIKRLNALLTILDCTPLPLHAN
MHQKQRLKNLERFAERESCVLLTTDVAARGLDIPDVQHVIHYQVPRTSETYVHRSGRTAR
ATKEGLSLLLIGPDDVMNFRKIYRTLGKDEELPLFPIQTKCMAAIKERVKVARKIEKIEY
HSGRAKQHNSWFQKAAEALEIDLDEDVLIGGGQDEFEDRQKMMMMKGMKLHLKHLLSQPI
FKNTMKTRYPTQMGKLTLPELPAREETALITVTNQKKKDKKK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaagataaagaaatcaaagcaaaagacctttcggtctcctgccaaatccaagcgggga
atccaggtgaagggaacctggacgccagtggagatggacgccagtcttttctcggaggag
gacatgggaggattagtgtgctttgaagagctcacagactacagcctgttcagttctaac
gctatggagaaggtggcaaagaaaagaaaagctgacgatggagaggattcagacaatcaa
gtgagtgaagacgacactggggagtcacagcagacggctaagaagaagaaaaagaagaac
gtgaaaaagaaaaagcaactggcagagtctacagatgatgccacttttgatagcaatgat
gatgcgcaagacagcaaggtcctcagtgatactcaagaagtgtccctagatgaaccagtg
gacagtggagaagaggataccgtggaacctgaaaaggtgaccaaaaagaaaaagaaaaag
aataaaaggcagaagaaatcaacaaccaatccaaatgttgctcaacagccaaaatctaag
aagaaggtggaaaactggacgaatgcaggcccctttaggtcatctggtcaggattgtgac
gtctcggcatggaaggatctgtttgttccagagcctgtccttaaggcgttgggctcgcta
ggttttaatgcacctacgcctattcaagccctggccttgccccctgcaatcagagacaag
atggacattttaggcgctgctgaaacaggaagcgggaaaactctgtcttttggcattccg
atgatccacatgattctggagtggcggaaagctcgggatgctcagagcaaagaggcactt
gacagccaggataatcccaccgaagagactgatgaagatgaccaagtcataccatcaggg
ctgaaggaaccctctgatcagcctgacattgcagttttgacagaggaagaggatgtgcag
ggtgaggaagacagtgaggtggaggaggactcccagcagaccggatgtgtcaaagtgatt
gaaaacgtggagtttgattttgaaacgactgaaactactgacaagagtgccaagaccaaa
gatttgtttgaaaagaacccgttactggggcttgtcctgaccccaaccagagaactggct
gtccaggttaaacatcacatagatgccattgcaaagtttacaggtatcaagactgccatt
gtggtggggggaatggctcctcagaagcaagggagagtgttaaatcgcaggccagagata
gtgatcgcaacacccggacgcctctgggagctaattagggaaagacatccgcacctctca
aatctcaaacggctcagatgccttgtgattgatgaagcagaccggatggttgagaaggga
cactttgcggaactgtcccagctcttggagatgttaaatgacactgaattcaaccccaag
aggcagaactttgtgttctctgccacgctgaccatggttcacgaggccccgacgaggata
ttacagaaaaagaaggggaagaagatagacaaggagagcaagctggagacactgatgggg
aaagtggggatcaaatccaagcccaagattatcgacctgaccaggaaggaagccacagtg
gagagcctaacagagacacgcatccactgtgacacggacgagaaggacttctacctgtac
tacttcctgctgcagtatcctgcgcgaaccatggtcttcgccaacagcattgactgcatc
aagcgcctcaacgcgctgctcaccattctggactgcaccccgctcccactacatgctaac
atgcaccagaagcaaagactgaagaacctggagagatttgctgaaagagagagttgtgtt
ctgctcacaacagatgtggctgctcgtggacttgacattccagatgtgcaacatgttatc
cattaccaggtccctcggacatccgagacctacgtgcacagaagtggcagaacagcccgg
gccacaaaggaaggtctcagtttgctcttgattggaccagatgatgtgatgaatttcagg
aaaatatacaggacactgggaaaagatgaagagctgcctctctttccaatacagacaaaa
tgtatggcagcaataaaggaacgtgtgaaagtggcaagaaaaattgagaaaattgagtat
cacagcggccgagcaaagcaacacaattcctggtttcagaaagctgccgaagcactagaa
atagacctggatgaggatgttttaatagggggaggtcaggatgaatttgaggacaggcaa
aagatgatgatgatgaaaggcatgaaactgcatttgaaacacttgctttcacagcccatt
ttcaaaaacaccatgaaaaccagatacccgacgcaaatgggcaaactgaccctgcctgag
ctgccagcaagggaagaaactgcactgattactgtaaccaaccagaaaaagaaggacaag
aagaaataa
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