Polyodon spathula (Mississippi paddlefish): 121324594
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Entry
121324594 CDS
T07273
Symbol
slc10a1
Name
(RefSeq) sodium/bile acid cotransporter
KO
K14341
solute carrier family 10 (sodium/bile acid cotransporter), member 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121324594 (slc10a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121324594 (slc10a1)
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
121324594 (slc10a1)
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Gene cluster
GFIT
Motif
Pfam:
SBF
DUF3981
Motif
Other DBs
NCBI-GeneID:
121324594
NCBI-ProteinID:
XP_041122595
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Position
12:complement(19561462..19579054)
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AA seq
354 aa
AA seq
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MPTATINQMEETYSGDSYWYHEDTLNATVSNSTSAFQSPFSPLMDNAISCITIIILFITM
VSLGCTMEISKIKVHILKPKGVAIAVVAQYGIMPLTAFALAKAFQLSSIESITVLICGCC
PGGNLSNIFALALKGDMNLSIVMTTCSTVLALGMMPLLLYLYCQGLANVENAVPYGGITI
ALAMTLVPCAIGVFLNARAPQYSKIIIRAGMSILLLASVAIAVLSGMVIGSTIWSVLSPT
LIGTAAFMPLAGYLFGYILSSLFRLNEKCKRTVSMETGCQNIQLCSTILKVAFPAEVIGP
LYLFPLIYILFQAGEALLFIILFRCYERMRPQADDSAKIVYVAVDSKVDEVKLP
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgccaccataaaccagatggaagagacatacagtggggacagctattggtac
catgaggacaccctcaacgccacagtgtctaactccaccagtgccttccagtcccccttc
tcccccctgatggataatgccataagctgcatcaccatcatcatcctcttcatcaccatg
gtctctttgggctgcaccatggagatctccaagattaaagtccacatactgaagcccaag
ggggtggccatcgctgtggtggcccagtatggcatcatgccgctcacagcctttgcactg
gccaaagccttccagctcagctccattgagtccattacagtgcttatctgtggctgctgc
ccaggaggaaacctgtccaacatctttgccctggcactcaagggggacatgaacctcagt
atcgtcatgacgacttgctccacggtgctggctctgggcatgatgccgctgctgctctac
ctgtactgtcagggcctggccaacgtggagaacgcagttccttacggcgggatcaccatc
gctctcgccatgacgctggtaccctgcgccatcggggtcttcctcaatgccagggcgccg
caatactccaagatcatcatccgggctggaatgagcattctgctgctggcctcagtggcg
atagccgtcctctcaggcatggtgattggaagcacgatctggagtgtcctgtctcccact
ctgatcggcacagccgctttcatgccgctcgccgggtacctgttcggctacattctctcc
agcctcttccgtctcaatgagaagtgcaaaaggacggtctccatggagacaggctgccaa
aatatccagctgtgctctactattctgaaagtggctttcccagctgaggtcatcggaccc
ctgtacctgttccctctcatctacatcctgttccaggctggagaggccctgcttttcatc
attctcttcagatgttacgaaaggatgaggccacaagcagacgattctgctaagattgtg
tatgtagctgtggacagtaaagtggacgaagtgaagctgccgtag
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