Polyodon spathula (Mississippi paddlefish): 121324596
Help
Entry
121324596 CDS
T07273
Name
(RefSeq) sorting nexin-6
KO
K17920
sorting nexin-5/6/32
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121324596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121324596
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121324596
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Macropinocytosis
Sorting nexins
121324596
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121324596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
AceES-2
FAN1_HTH
GCIP_C
AAA_lid_7
DUF3381
Motif
Other DBs
NCBI-GeneID:
121324596
NCBI-ProteinID:
XP_041122597
LinkDB
All DBs
Position
12:9242264..9252399
Genome browser
AA seq
407 aa
AA seq
DB search
MMQEGLDDGPDFLSEEDRGPRAVNVDLQTDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQNEFSVVRQHEEFIWLHESFVENEEYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPVLRKDMNFHVFLEYNQDLSVRGKN
KKEKLEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDASAKSDKMIRAHK
NTADDVNAIASTLYTLGTQDSTDVCKFFMKISELFEKTRKIEARVAADKDLKLADLLKYY
LRESQAAKDLLYRRGRSLVDYENANKALDKARAKNKDVLQAETSQQVCCQKFEKISEYAK
QELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSSLGVLKGDT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagaagggttggatgacggccccgacttcctctctgaagaggatagaggaccc
agagccgtgaatgtggatcttcaaacagatgcaactcttcaagttgacatttctgacgct
ctgagtgaaagggacaaagtaaaatttactgttcacaccaagagtacattaccaaatttt
aagcaaaatgaattttctgttgttcgacaacatgaagagtttatctggcttcatgagtcc
tttgttgaaaatgaagaatatgcaggctatattatccctccagctccaccaaggcctgat
tttgatgcatcaagagaaaaactacagaaacttggggaaggagaaggatcaatgactaag
gaagagttcactaaaatgaaacaagaattggaggcagagtacttggccatattcaagaaa
accgtggcaatgcatgaagtgttcttgtgccgtgtagcagcccatccagtcctaaggaag
gacatgaactttcatgtgttcttagaatataaccaagacctaagtgtacgaggcaaaaat
aagaaagagaagctggaagacttttttaaaaacgtggtcaagtctgcagatggagtgctc
gtggcaggtgtaaaagatgtagacgatttcttcgaacatgagaaaaccttccttttagaa
tatcacaacagagttaaagatgcttcagccaagtcagataaaatgataagagctcataaa
aatactgcagatgatgttaatgcaattgcctctacattatacacactaggaactcaagac
tcaaccgatgtgtgcaaatttttcatgaaaatatcagagttatttgaaaaaacacggaaa
atagaagcaagggtggcagcagacaaggatctaaaactagctgatttgctaaaatattac
ctgagggagtcacaggctgcaaaggatctcctctaccgacgagggaggtcattggttgat
tatgagaatgcaaacaaagctttggataaagcaagagccaaaaacaaagatgttcttcaa
gcagaaactagccagcaagtttgctgtcaaaaatttgaaaaaatatctgaatatgcaaaa
caagagcttatagactttaagaccagacgagttgctgctttcaggaaaaaccttgtagaa
ctggcagaactggaactcaagcatgccaagggtaatttacagctgctccagagctccctt
ggggtcttgaaaggtgacacataa
DBGET
integrated database retrieval system
