Polyodon spathula (Mississippi paddlefish): 121324603
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Entry
121324603 CDS
T07273
Name
(RefSeq) 26S proteasome regulatory subunit 8-like
KO
K03066
26S proteasome regulatory subunit T6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121324603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pspa03051
]
121324603
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
121324603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
RuvB_N
PRS7_OB
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
NPHP3_N
AAA_33
AAA_14
AAA_17
Parvo_NS1
ATPase
FapA
IstB_IS21
PhoH
AAA_24
AAA_7
DUF815
AAA_25
Sigma54_activat
APG6_N
bpMoxR
ABC_tran
HR1
DUF5906
RNA_helicase
AAA_11
Zeta_toxin
DivIC
AAA_19
TsaE
Motif
Other DBs
NCBI-GeneID:
121324603
NCBI-ProteinID:
XP_041122604
LinkDB
All DBs
Position
12:complement(40337816..40348342)
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AA seq
406 aa
AA seq
DB search
MALDGPEHMEMEEVKGGTGLRQYYLSKIEDLQLTVNEKSQNLRRLQAQRNELNAKVRLLR
EELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS
YTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGI
AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMARE
HAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDI
LDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVK
GVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggacggtccagaacatatggagatggaggaagtgaaaggaggcacaggcctc
agacagtattacctctccaaaatagaagacctacagctgacggttaatgaaaagagtcag
aacctcagacgtctgcaggctcagaggaatgaactaaatgcaaaagtccgccttttacgt
gaagagcttcagctgctgcaagagcagggctcatatgtaggagaggtggtgagagccatg
gataagaagaaagtgcttgtcaaggttcatccggagggaaagtttgttgtggatgtagac
aaaaacattgatatcaacgatgtgacccctaactgccgcgtagcccttaggaatgacagc
tacacccttcacaaaatcctgcccaacaaagtggacccgcttgtgtcactgatgatggtg
gagaaggttccagactccacctatgaaatgattggaggcctggacaagcagatcaaagaa
atcaaggaggtcattgagctgcctgttaagcaccctgagctgtttgaagccctggggatt
gcacagcccaagggagtgttgctttatggacctccgggaactggaaaaacactacttgca
agagctgtagcccatcatacagactgcacctttatcagggtttcaggctccgagctggtc
cagaaatttattggagagggagctcgtatggtgcgagagctgtttgtgatggctagagaa
catgctccgtccatcatcttcatggatgagattgactcaatcggctcgtcacgtcttgag
ggcggctccgggggggacagcgaagtgcagaggaccatgctggagctgctcaaccagttg
gatggatttgaggccaccaaaaacatcaaggtgatcatggctactaaccggatcgacatc
ttggattcagccctgctgcggccaggtagaatagacagaaagattgaattccctcctccc
aatgaagaggcccgtttggatattctgaagattcattctcgtaagatgaatctgacacga
ggcattaacctgcgcaaaattgctgagctcatgccaggggcatctggggctgaggttaag
ggtgtgtgcacagaggctggaatgtatgcgctgagagagaggagggttcatgttacacaa
gaggactttgagatggctgttgctaaggtcatgcaaaaagatagtgaaaagaacatgtcc
atcaagaagctgtggaagtaa
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