Polyodon spathula (Mississippi paddlefish): 121324605
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Entry
121324605 CDS
T07273
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 11-like
KO
K03036
26S proteasome regulatory subunit N6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121324605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pspa03051
]
121324605
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
121324605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN6_N
PCI
RPN6_C_helix
TPR_ESP1
TPR_12
TPR_3
DDRGK
Motif
Other DBs
NCBI-GeneID:
121324605
NCBI-ProteinID:
XP_041122608
LinkDB
All DBs
Position
12:complement(40914001..40937076)
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AA seq
422 aa
AA seq
DB search
MAAAAVVEFQRAQSLLSTDRNASIDILHSIVKRDIQENDEEAVRVKEQSILELGSLLAKT
GQAAELGGLLKYVRPFLNSISKAKAARLVRLLLDLFLDMEAATGQEVQLCLECIEWAKAE
KRTFLRQALEARLVSLYFDTKRYQEALNLGSQLLRELKKMDDKALLVEVQLLESKTYHAL
SNLPKARAALTSARTTANAIYCPPKLQAALDMQSGIIHAAEEKDWKTAYSYFYEAFEGYD
SIDSPRAITALKYMLLCKIMLNFPEEVQALISGKLALRYAGRQTDALKCVAQASKNRSLA
DFEKALTEYRGELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISTLIKLPKGD
VERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKK
LT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcggcggtggtggagtttcagagggctcagtctctcctcagcacggaccgc
aacgcgtccatcgatattttacactcgatagtgaagcgagacatccaagagaacgatgag
gaggctgtgcgagtcaaagagcagagcatcctggagctggggtcgctcctggccaagaca
gggcaggctgcagagctcggtggcctgttgaagtatgtgcgaccgttcctaaactcgatc
agcaaggccaaggcagccaggctggttcgcttgttactcgacctatttctggacatggag
gcagccactggccaagaggtccagctgtgccttgagtgcattgaatgggcaaaagcagag
aagaggacttttctacgtcaagccttggaggctcgcctggtttcactgtatttcgacact
aagagataccaggaggctctgaatcttgggtcccagttgctgcgggagctgaagaagatg
gatgacaaggcactgctggtggaggtgcagctgctggagagtaagacgtatcatgctctc
agtaatttgcccaaagcacgggctgccctcacttcagccaggacgactgccaacgccatc
tactgcccacccaagctgcaagccgccctggacatgcagtcagggatcatccatgcagca
gaagagaaggactggaaaacagcatactcctatttctacgaggcgtttgagggctatgat
tctattgatagcccccgagccatcacagcactcaagtacatgctcctctgcaagatcatg
cttaacttcccagaggaggtgcaggccttgataagtggaaaactagctctgcgctacgca
ggacgacagacagacgcactgaaatgtgtggctcaagccagcaagaatcggtctttggca
gacttcgagaaggctctgacagagtaccgaggggagctgcgggacgaccccatcatcagc
acccacctggccaagctttacgacaacctgctggagcagaacctcatccgggtcatcgag
cccttctccagagtgcagatcgaacacatatcaactcttattaaacttccaaagggcgac
gtagagagaaaattgtcacagatgattctggacaagaagtttcatgggatcctggaccag
ggagagggtgtgctgattatatttgatgagccaccagtagataaaacatacgaagcagct
cttgaaaccattcagaacatgagcaaagtagtggattcactctacaacaaagccaagaag
ttaacatag
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