Polyodon spathula (Mississippi paddlefish): 121324654
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Entry
121324654 CDS
T07273
Name
(RefSeq) WD repeat-containing protein 1
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121324654
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121324654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
eIF2A
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_SPT8
NBCH_WD40
Ge1_WD40
RMC1_N
WD40_RFWD3
WD40_like
Beta-prop_IFT122_2nd
Beta-prop_WDR19_2nd
Beta-prop_WDR11_1st
PROPPIN
Beta-prop_ELP1_2nd
Beta-prop_Nup120_160
DUF5711
PQQ
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
121324654
NCBI-ProteinID:
XP_041122696
LinkDB
All DBs
Position
1:95274964..95292445
Genome browser
AA seq
607 aa
AA seq
DB search
MPYELKTVFASLPQVERGVAKILGGDPKGNNFLYSNGKCVIIRNIENPAIADIYTEHAHQ
VSVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDISWTEDSKRIAAV
GEGREKFGAVFLWDTGSSVGEITGHSKVINSVDVKQTRPYRIVTGSDDNCGAFFEGPPFK
FKFTMMDHSRFVNCVRFSPDGNRFASASADGQIFIYDGKNGEKISALGGGKAHDGGIYAV
SWSPDSTRLLSASGDKTAKIWDVANNSVVTTFNMGSDVLDQQLGCLWQKDHLLTISLSGY
INYLDKNNPNRPLRIIKGHSKSIQCLTVHKNDGRSYIYSGSHDGHINYWDAVTGENGSFS
GKGHSNLVSRMAIDESNQLVSCSMDDTVRFTSVTKKEYSASDLVKMDVQPKCIAVGPGGY
AVAVCIEQLVLLKDKKRGFGMDNLGYKPEVAAIHPGGTTVAVGGSDGKVHLYSIQGNTLK
DDGKTLEVKGPVTDLAYSHDGAYLAVCDANKAVTVFTVADGYEEKSVFYGHHAKVVCIAW
SPDNEHFASGGMDMMVYIWTVNDSDTRIKMPDAHRMHHVSSLAWLDEHTLITTSHDSSVK
QWTVTYK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgaacttaaaacagtgtttgccagcctcccacaggttgaacggggagttgcg
aaaatccttggaggtgatccgaagggaaacaacttcctttacagcaacgggaagtgtgtc
atcatccgaaacattgaaaatccagcaattgcagatatctacactgagcatgctcaccag
gtttctgttgctaagtatgctcccagtggattctacattgcatctggagatgtctctggg
aagctgagaatctgggacaccactcaaaaggaacacctccttaagtatgaataccagccc
tttgcaggaaaaattaaggacatttcttggacagaagatagcaagagaatagcagcagtt
ggagaagggcgggagaagtttggagcagtgttcctgtgggacactggctcgtcggttggc
gagatcactggtcacagcaaggtcattaacagtgtggatgtaaaacagacacgaccctac
cgcattgtaaccggcagcgatgataactgtggagcattctttgagggaccgccatttaaa
tttaagtttacaatgatggaccacagccggtttgtcaactgcgtgagattttcacctgat
gggaacagatttgcttcagctagtgcagatggccagatctttatctatgatggaaaaaat
ggagagaagatctctgctcttggcggtggaaaggcccatgatggcggtatatatgctgtt
agctggagtcctgacagcactcggctgctttctgcttctggagacaaaacggccaagatc
tgggacgttgctaataactctgtagtgaccacttttaatatgggatcagatgttttggat
cagcagttgggctgcctgtggcagaaggaccacttgctgaccatttctctgtctggctac
atcaactaccttgacaaaaacaatccaaacaggcctttgcgcataatcaagggccacagc
aaatccatccagtgtcttactgtgcataaaaatgatggacgatcatacatctactctgga
agtcatgacggtcatatcaattactgggatgctgtaactggagagaatggtagctttagt
ggaaagggccacagcaacctggtgtccaggatggctatagatgaatcaaaccagctggtc
agttgcagtatggatgatacagttcgtttcaccagtgtgaccaagaaagaatacagtgct
tcagaccttgttaaaatggatgtccagcccaagtgtattgcagtgggaccaggaggttat
gcagtggctgtttgcattgagcagcttgtgctgctgaaggataagaagagaggttttgga
atggataaccttggttataagccagaagtggcagctattcacccaggaggcacgaccgta
gcagtgggaggatcggatggcaaagtccacttgtactccattcaaggaaacaccctgaag
gatgatggaaagaccttggaggttaaggggcctgtgactgaccttgcttattcccatgat
ggtgcctaccttgctgtctgtgatgcaaacaaagctgttactgtcttcacagtggctgat
ggatatgaagagaaaagtgtcttctatggccaccatgctaaagtggtctgcattgcttgg
tctccagacaatgagcattttgccagtggaggcatggacatgatggtctatatctggact
gtaaacgattcagacacaagaatcaagatgccagatgcccacaggatgcatcacgtcagc
agcctggcctggttagatgagcacactcttatcacaacatctcacgactcttctgtcaag
cagtggactgttacatacaaataa
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