Polyodon spathula (Mississippi paddlefish): 121324692
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Entry
121324692 CDS
T07273
Name
(RefSeq) ras GTPase-activating protein-binding protein 1-like
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121324692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121324692
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121324692
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121324692
5.6.2.5 RNA 5'-3' helicase
121324692
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121324692
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121324692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
121324692
NCBI-ProteinID:
XP_041122745
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All DBs
Position
12:complement(35158556..35166088)
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AA seq
470 aa
AA seq
DB search
MVMEKPSALLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDSSGKPAEAVHGQAE
IHKKVMSLSFRDCHTKIRHVDAHASLNDGVVVQVMGELSNNMQPMRRFMQTFVLAPEGTV
ANKFYVHNDIFRYQDEVFGDSDTELPEESEEEVEEPEDRPHSPDVVQDDSYYQQPASHEL
EEHLEEQHMTPEPEPEPEPELAVEELKIEPAVEEEPCAVEHIEKCPSPTPADPAPTIQED
SRVFSWASVTSKNLPPSGVAPVSGIPPHVVKAPMAQPRVEPKPETQTTAQRPQRDQRVRE
QRPGAPIHRAPRPVREGEQGEAEVRRVVRYPDSHQLFVGNLPHDADKAELKDFFEGYGNV
VELRINSGGKLPNFGFVVFDDPEPVQKILANKPIKFRGDVRLNVEEKKTRAAREGDRRDI
RPRGPGGPRDKFSGGVRGPPSRGGVMSQKPSFGAGRGAGPSEGRYMGPRQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgccctgctggttgggcgggagtttgtcagacagtactac
acccttttgaaccaggcaccagactacctgcacaggttttatgggaagaattcctcttat
gtccatggtggtctggacagcagtggaaaacctgctgaggctgttcatggacaagccgaa
attcacaagaaggtgatgtccttgagcttccgagattgccacacaaagatccgccacgtg
gatgcccatgcctctctgaatgatggggttgtggttcaagtgatgggagagctttccaac
aacatgcagcccatgaggaggttcatgcagacttttgtgctggcacctgagggtactgtt
gcaaacaagttctacgttcacaatgacattttccgctaccaggatgaggtcttcggggat
tcagacactgaacttcctgaggagtcggaagaggaagtggaggagccagaagacagaccc
cactccccagatgtagtccaggacgactcgtactatcagcagcctgccagtcatgaattg
gaagagcatttggaagaacagcatatgacgccggaacccgaaccggaacctgagccagaa
cttgctgtagaagaactgaaaatagaacctgcagtggaggaggaaccctgtgcagtggag
catattgagaagtgtccatctccaacgcctgcagatcctgcacctactatacaagaggac
tccagggtattctcatgggcatctgtcaccagtaagaatcttccccctagtggggtggcc
ccagtctctggaattccacctcatgtagtcaaagctcctatggcacagccaagagtggag
ccaaaacccgaaacacaaactacagcacaacgaccccagagagaccagagggtaagggag
cagaggccgggtgcgccaatccacagggctccacgaccagttcgtgaaggagaacagggt
gaagcagaagtgcgtcgtgtggtgaggtatccagacagtcatcagctctttgtgggtaac
ctaccccatgatgctgacaaggcagagctgaaggacttctttgaaggttatggtaatgtg
gtagaactgcgaatcaacagtgggggcaagctgcccaactttggatttgtggtgtttgat
gatcctgagcctgtgcaaaaaattctcgccaacaagccgatcaaattccgaggagacgtg
cgcctgaatgttgaagagaagaaaactcgtgccgcacgggaaggtgaccggcgggatatt
cgacccagggggcctggaggtccacgtgacaagtttagcggaggagtcaggggaccgcca
tccagagggggggtaatgtcacagaaacccagctttggagcgggacggggtgctggaccc
agtgaaggccgctacatgggacctcgccagtga
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