Polyodon spathula (Mississippi paddlefish): 121324710
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Entry
121324710 CDS
T07273
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121324710
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
121324710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
NuiA
RB_B
Zn_ribbon_tTFIIB
Fib_succ_major
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
121324710
NCBI-ProteinID:
XP_041122770
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All DBs
Position
12:3422050..3499793
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AA seq
679 aa
AA seq
DB search
MSSRVCKNCGGTDIDVDPARGDAVCTGCGSVLEDNIIVSEVQFMDNGGGGSSAVGQFVSS
DCSGKGPVLGTGFHTSLGKESRAQTLLNGKRQVNHLGHQLQLNKHCLDTAFNFFKMAVSK
QLTRGRKMSHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPA
IDPCLYIPRFAHMLEFGDKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTVKEIIRVVKVCESTLRKRLTEFEDTPTSSLTIDEFMKVDLTEECDPPSFTAGQNK
EKFKQLEQELAKKLDEVAGEITCYQDEIETELENSRPKLKGPYASYAVEDSVMDDSISVA
SGAPGEEELDDLELEAAANHLNNNFYCEILDEKEDDEEERTAIEKDMSPVKRLPLASLLG
PLPTAASLGLTDSIKECITAKKDDKESSENGELDLSGIDDSEIERYILNEKEVKIKTQMW
MKENADYLKDQKEKEERIAKEKELGIYKEQKPKKSSKKREPIRASTAGEAIEKMLEQKKI
SSKINYDVLRDLNSKGSSSPTQDEEGSEEGGSAKKLSTSRKSANSRSLSAPVSNMGKRLR
PLISTRPAKKLASEQGFGSTSSEPSDSSKPVVVESGPVFYNNEDDAEEEEEEEEEPCVSA
MLLIGGNDYGCDVDDDDGY
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccgggtgtgtaagaactgtgggggcacagacatcgatgtggacccggcgcga
ggggatgccgtgtgtacgggctgtggctctgtgctggaggataacatcatcgtctccgag
gttcagttcatggataatgggggcggaggatcctctgctgtgggccagttcgtctcctcg
gattgttcgggaaaagggccagtgctgggaacaggatttcataccagtttagggaaggaa
tcccgagcacagactttactgaatgggaaacgtcaagtaaaccacctgggccaccagctg
cagctgaataagcattgcctggatacagccttcaacttctttaaaatggcggtgagcaaa
cagctgactcggggcaggaagatgagtcacgttattgcagcctgcctctaccttgtctgc
agaacagaggggactcctcatatgcttcttgatctgagcgaccttttacaggtgaatgtg
tacgttttgggaaaaacatttcttctcttggctagagagctctgcattaatgctcctgca
atagacccatgtctctatatccctcgctttgcacacatgctggagtttggagataagaac
cacgaggtgtcaatgactgctctgaggttattgcagaggatgaagagagattggatgcac
acaggacgcaggccatcaggactctgtggagcagccctccttgtagccgctaggatgcat
gaatttcgtcgcactgtgaaagaaattattcgagtagtcaaggtttgcgaatctactcta
aggaaaagactaacagaatttgaagatactccaacaagcagcctaacaattgatgagttc
atgaaagtagacttgacagaggaatgtgatcctccgtcattcacagcaggacagaacaaa
gagaaattcaaacagctcgagcaagagttagccaagaagcttgatgaagttgcaggtgaa
ataacatgctaccaggatgaaatagagactgaactggagaacagtcgaccaaagctgaaa
ggaccatatgcatcttacgcagtggaagactctgtgatggacgacagtatctcagttgct
tctggtgctcccggggaagaggaattggatgatttggaattggaggcagcagcgaatcac
ctcaacaataatttttattgcgaaattcttgacgaaaaggaggatgatgaggaggaaagg
acagcaatagaaaaagacatgtcccctgttaaacgtcttccccttgcctcgttactgggg
ccgctccctacagctgccagccttggccttacagactccattaaggaatgcataacagcc
aaaaaggatgacaaagaaagttctgaaaatggggaattggatctgagtggaattgacgac
agtgaaattgagaggtatatcttaaatgaaaaagaagtcaaaattaaaacacagatgtgg
atgaaagaaaatgctgattacttgaaggatcagaaggaaaaggaggaaaggatagcaaaa
gaaaaagaacttgggatctataaggagcaaaagcctaaaaagtcatctaaaaagcgagag
cctatccgggccagcacggcaggggaggctattgagaagatgctggagcagaagaagatc
tccagtaagattaattatgatgtgctgcgggacctgaacagcaaaggaagcagctctccg
acgcaggacgaggaaggcagcgaggagggcggcagtgcgaagaaactgtcaaccagcaga
aaatcagcaaacagcaggagcctgtccgctcctgtcagcaacatggggaagaggttacgg
ccattaatttcgactcgacccgccaagaagcttgcatctgaacagggatttggctccact
tcatctgaaccttcagactcctccaagcctgtggtggtagaaagcggccctgtcttctac
aacaacgaggatgatgctgaggaggaagaggaggaggaggaagagccctgcgttagtgcc
atgctgctcataggaggaaacgattatggctgcgatgtggatgacgacgatggatattag
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