Polyodon spathula (Mississippi paddlefish): 121324726
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Entry
121324726 CDS
T07273
Name
(RefSeq) DDB1- and CUL4-associated factor 4-like isoform X1
KO
K11799
DDB1- and CUL4-associated factor 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121324726
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
121324726
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Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
121324726
NCBI-ProteinID:
XP_041122799
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Position
12:complement(16459917..16470576)
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AA seq
514 aa
AA seq
DB search
MSRGCSVVAGMKRGNWQGRGDWGRADQRQHHNPGRQRESCSHRFECGGPGTSQNEPSPET
ASPSLPQSSRAPELPGFYFDPEKNRYFRLLPGNNNCNPLTREGIQQREQEGRRVRLLEED
EKPRKKSYRTGLNSTILLQKRHLGLVPETSYCRLIHELKVSSMRRHKLEVQSSDSSSPNT
DNFKLIVADSACERVFTVNDVEHGGCKYGIMNFKGCSEGSLSVEMCDNLYFTNRKVNSIC
WASVTHPDSHVLLCLVGIADTPGCVSLLPASLFSNSNPDQPGMLCSFKISTAWSCAWCLN
PQADKNFSTGLSRLVIVTDAVTGRRQTYGINSDVLAQQFALRAPVLYNGCRTGEIFSIDL
RQRARRGHGWKGVRFYQDSAVTSVRILQDDNYLIAADMLGKVKLWDLRMAKAVQQYEGHH
NEHAYLPVHVNEQEGLLLAVGQDCYTRLWSLGDGRLLRTIPSPHPAGKDSVPSVVFSSQL
GGHRGLPGLLMAVSQDLYYFSYNSDYQEQRGADA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtggatgtagcgttgtcgcaggaatgaagagaggcaactggcagggtcgagga
gactggggaagagctgatcaaagacaacatcacaatccaggcaggcaaagggaaagctgc
agccacaggtttgagtgcggtggtcctgggacgtcccagaatgaaccctcccctgaaaca
gcctccccgagcctgccccagagctcacgagcaccagagctcccagggttttactttgac
cctgagaagaatcgctatttccgccttctcccaggaaacaacaactgcaaccctctgacc
agggaggggatccagcagagggagcaggaggggcgcagggtgcggctactggaggaggac
gagaagcccaggaagaaaagctaccggactggtttgaactccacaatccttttacagaag
agacacttgggtttagtaccagagacctcgtactgcaggctgatccatgaactgaaggtg
agcagcatgagacgacacaagctggaggtgcagagttcagactccagcagccccaacaca
gacaacttcaaactcatagtggcagactctgcctgcgagcgcgtgttcactgtgaatgac
gtggagcacgggggctgcaagtacggcatcatgaacttcaagggctgcagtgagggctct
ctctccgtggagatgtgtgataacctctacttcaccaaccgcaaggtgaattccatctgc
tgggcatcagtaacgcaccctgactcccacgttctgctttgtctggtgggcatcgcagat
acccctggctgtgtcagccttctgccagcttccttatttagcaactccaacccagatcag
ccgggaatgctctgcagctttaagatttcaacagcctggtcctgtgcctggtgccttaac
ccacaggcagacaagaacttcagcacaggtttatcgagactggtgattgttacggacgct
gtgacgggccgcagacagacctacgggatcaatagtgacgtgctggcacagcagtttgca
ctgcgggctccggtgctgtacaatggctgtcggacgggagagatcttcagcattgacctg
cggcagagagccaggagggggcacggctggaaaggggtgcgcttctaccaggactctgcc
gtcacctcggtgcgcatcctgcaggatgacaactacctcattgcagccgacatgctggga
aaggtaaagctctgggatctgcggatggctaaagcagtgcagcagtacgaagggcatcac
aatgagcatgcctacctgcccgtccacgtgaacgaacaagaagggctgcttctagcagtt
ggtcaggactgctacacgaggctgtggagtctgggagatggccggctgctgcggaccatc
ccgtcgccccacccggccggcaaggactctgtgcccagcgtggtgttctcttcacagctc
gggggccacaggggcctgccagggctgctcatggcagtgagccaggacctctactacttc
tcatacaactcggactaccaggaacagcgaggggcagacgcttag
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