Polyodon spathula (Mississippi paddlefish): 121324768
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Entry
121324768 CDS
T07273
Name
(RefSeq) calpain-3-like isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121324768
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121324768
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
121324768
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C2: calpain family
121324768
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
Motif
Other DBs
NCBI-GeneID:
121324768
NCBI-ProteinID:
XP_041122863
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Position
12:complement(18224186..18265113)
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AA seq
663 aa
AA seq
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MPAVISSSLDYQIGCSPVPQKSTDTTGAPGGIYSAILSRNFPIIDKRYKNFLELRDKYLK
KKVLFEDPVFKADDTSLFYSQKFPIKFEWKRPPEICENPQFIIGGANRTDICQGDLGDCW
FLAAIACLTLNEKLLYRVIPPDQSFTENYAGIFHFQFWRYGDWVDVVIDDRIPTLNNQLV
FTKSAERNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFEIKEAPKELFK
IMKKALEKGALMGVSIDDTMGPTRKVAPSSLIVKMIEQMLGDSVQGGDSRKQGEQPAGSL
VPVRFETQTSSGLVKGHAYSVTGVEEIQHKETRVRLIRLRNPWGQVEWNGPWSDNSKEWA
TIEKHEKERLQHQSVEDGEFWMAFEDFKKNFTKIEICNLTPDALEKDKLHKWTVSVNEGR
WVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDNEKVCTFVVSLMQKNRRKERKMGA
NLFTIGFAIYEVPKEMHNNKQHMPKDFFLFNSSKARCKSYINLREVTQRFRLCPGEYVII
PSTYEPHQEGEFLLRVFSEKRSTSEEIENKIEAEHPVPPKKKQKPIIFVSDRAKANKELN
TDDYMQEEETKTMEKKKVSFPVACWDERGALISVALNPWLSGLAHKPASEPKMKAVRSKL
QGV
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgtgatctcctccagcctggactatcagattggctgctcccccgtgccccag
aagagcactgacacaaccggggctcctggcgggatctactcagccatcctgagtagaaac
ttccccatcattgacaagagatacaaaaacttcttggagctccgcgacaaatacttaaag
aagaaggttctgtttgaagatcctgtgttcaaggcagatgacacatctctgttctacagc
cagaaattccccatcaagtttgagtggaaaagaccgcctgagatctgtgagaatccacag
ttcatcatcggaggagctaatagaactgatatctgtcagggggatctgggggactgctgg
ttcctggctgccatcgcctgcctgactctcaatgagaagctgctctatcgagttatacct
ccagaccagtccttcacagagaactatgctggcatcttccacttccagttttggcgctat
ggcgactgggtggatgttgtcattgacgaccggatccccaccctcaacaaccagctggtg
ttcaccaaatctgcagaaaggaatgagttctggagcgctctgctggagaaggcctatgcc
aagctccacggttcctatgaagcactgaaaggaggcaacaccaccgaggcaatggaggac
ttcaccgggggagtgacagagttctttgagattaaggaggctcctaaagagttattcaag
atcatgaagaaagctctggagaagggcgccctcatgggcgtgagtatcgacgatacaatg
gggccgacccgcaaagtggctccttccagtttgattgtaaagatgattgaacagatgctc
ggtgactctgtgcagggtggtgatagcagaaaacagggggagcagccagcagggtccttg
gttccagttcggtttgaaacacagaccagcagtggattggttaagggccatgcctactct
gtgactggggtggaggaaatccagcacaaggagacaagggtacgtctgatcaggctcagg
aacccctgggggcaggtggagtggaacggcccgtggagtgacaactccaaagaatgggct
acgatcgagaaacacgagaaagaacgtctgcagcatcagagcgtggaggatggagagttc
tggatggctttcgaagatttcaagaagaacttcactaagatcgagatctgtaacctgact
ccggatgctctggaaaaagataagctccacaagtggacggtgtcggttaacgagggccga
tgggtgcggggctgctctgctgggggctgccggaactatccagacacgttctggacaaac
ccgcagtaccgactacgtctgctagaggaagatgacgaccccgaagacaatgagaaagtt
tgcaccttcgtcgtgtcgctcatgcagaagaaccgcaggaaggagcgtaagatgggggcc
aatctcttcaccatcggattcgccatttatgaggttcccaaggagatgcataacaacaag
caacacatgcccaaagatttcttcttgttcaactcctccaaggcgcgttgcaagtcgtac
atcaaccttcgggaggtgactcagcggttccgactgtgccccggggagtacgtcatcatc
ccctcaacctacgagccccaccaggagggcgagttccttctcagagtcttctcagagaag
aggagcacctcagaggagattgagaacaagatcgaggccgaacatcctgtgccacctaag
aaaaagcagaagccaatcatctttgtttctgatagagctaaggccaataaggagctcaac
actgacgactacatgcaggaagaggagacaaagacaatggagaagaagaaggtttcattc
cctgtagcatgctgggatgagagaggggctttaatctctgttgctctaaacccctggctt
tctgggttagctcacaaacctgcctcagaacccaaaatgaaggcagttcgctcaaaactg
caaggggtgtaa
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