Polyodon spathula (Mississippi paddlefish): 121324770
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Entry
121324770 CDS
T07273
Name
(RefSeq) estrogen receptor beta-like
KO
K08551
estrogen receptor beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
121324770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121324770
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121324770
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
121324770
Nuclear receptors [BR:
pspa03310
]
3. Estrogen like
3A. Estrogen receptor
121324770
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GFIT
Motif
Pfam:
ERbeta_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121324770
NCBI-ProteinID:
XP_041122867
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Position
12:3821784..3839014
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AA seq
569 aa
AA seq
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MIQSPERSSCNQSKKPGPALNMTDLPNTEPHLLQLQGVGSSKVSGMTCSPGISCPISHLG
AMPALMMERHAVCIPSPYRDSNHDCTALAFYSPSMLGYSGHSNGSILDSPTVRPCLSPSA
FWHPPSDISSLALDCQQMHTDPPRSPWKEERSTVQILSVSSKESSRIMKNSEDQANPTGR
CSGSKQAMHYCTVCNDFASGYHYGVWSCEGCKAFFKRSIQGHNDYICPATHQCTIDKNRR
KSCQACRLRKCYEVGMMKCGTRRERSNYRIVRHRRLSQGQVQPSGKAIKTSESGLLQMRR
IHCSSLSPEMLISSVLEAEPPEIYLMSYPMKPFTEVTMMTSLTSLADKELVHMVSWAKKI
PGFTEFSVYDQVHLLECSWLEVLMVGLMWRSVNHPGNLVFATDLILKRDEGNCVEGLLEL
FDMLLATISRFRELNLQQEEYLCLKVMVLLNSTMFPGPSEKPEEIESRDKLLKLLDAVTD
ALVWVISKKGLSFQQQSARLANILMLLSHIRHASNKGIEHLYSIKSKSVVPFRELLLEML
HTYSLHFRRIPSITTSECSPEEQTKEPII
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgatccagtcaccagaaagaagctcctgtaaccaaagcaaaaagcctgggcctgcttta
aatatgacagatttgccaaatacagaaccccacttgctgcagctacaaggtgttggatca
agcaaagtgtcaggaatgacctgctctccgggaatcagttgccctatttcacacctcggg
gcgatgcctgcattgatgatggaacgacatgctgtttgcatcccttccccatacagggat
agcaaccacgattgcacagcactggcattttatagcccttcgatgcttgggtacagtggg
cacagtaatggcagcattctggacagcccgacagtaaggccgtgtttgagcccctctgca
ttctggcatccaccaagcgatatttcctcattagcccttgactgccagcagatgcataca
gatcctccaaggagcccttggaaagaggagagatcgacagtgcaaatactgtcagtgagc
agcaaggaaagtagcagaataatgaagaattcagaagatcaggccaaccccactgggcgc
tgctcgggttcgaaacaggccatgcactactgcacagtgtgcaatgactttgcctcaggt
tatcactacggggtctggtcgtgcgaggggtgcaaagcgttctttaaaaggagcatccaa
gggcacaacgattatatctgcccagctacacatcagtgcaccatagacaagaacaggagg
aaaagctgccaagcatgccggctgagaaagtgctatgaagttggaatgatgaaatgcggt
acaagaagagagcgttctaattatcgcattgtacgacacaggcgtctttctcaaggccaa
gtgcagcccagtggtaaagccatcaaaaccagtgaaagtggcttactgcagatgaggagg
attcactgcagttctctgagccctgaaatgctaatttcttcagtattagaggctgaaccg
cctgagatttatttgatgagctatcccatgaagccattcactgaggtcaccatgatgaca
tcattaaccagccttgcagacaaggaactagttcacatggtcagctgggccaaaaaaatt
ccagggtttacggagttcagtgtgtatgaccaggtacacctattggagtgctcctggtta
gaggtgctgatggtagggctgatgtggagatctgttaatcatccagggaatctcgtcttt
gcaactgaccttattttaaaaagggacgaagggaactgtgtggaagggctgctggagctt
ttcgacatgcttctggctacaatttcaaggtttcgagagctgaatctgcagcaagaggag
tatctctgcctcaaggtcatggtcctcctcaactccactatgttccctggtccctcagag
aagccagaagaaattgaaagtagagataagctgcttaaacttctggatgcagtcactgat
gctttagtctgggttatttcaaagaagggactctcttttcagcagcagtcagcacgcctg
gctaacatcctgatgctgctctcccacatcagacatgcaagtaacaaaggtattgagcac
ctctacagcataaagtctaaaagtgtagtgcctttccgtgaattgctgctggagatgctg
cacacctactctctgcacttccgcagaataccatccatcacgacatcagagtgcagccca
gaggaacaaaccaaggagcccatcatctga
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