Polyodon spathula (Mississippi paddlefish): 121324798
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Entry
121324798 CDS
T07273
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121324798
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121324798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121324798
Spliceosome [BR:
pspa03041
]
Common components
Common spliceosomal components
SR proteins
121324798
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
121324798
NCBI-ProteinID:
XP_041122914
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All DBs
Position
12:17915127..17922630
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AA seq
284 aa
AA seq
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MSGCRVFIGRLSPHARERDVEKFFKGFGHIREVNLKNGFGFVEFDDHRDADDAVYELNGK
ELCNERVTIEHARSPRGRGGGGAGGGGGGRFSPRFSSYRQTRGSMYGPPVRTEHRIIVEN
LSSRISWQDLKDMMRKVGEVTFVDAHRSNKNEGVVEFASRSDMKNALDKLDGTELNGRKL
KLTEDRKRKSRSRSRSRSYTRSRSRSRSRSRSKSPSRSRSRNRSRTRSRSVSHSPERKPL
PRAAPHSPSRSKSRSHSRSKSRSRSPPVQKRQSRSRSQSTESRH
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatgtcgagtgtttatcggtcggctgagcccccacgccagagagagggacgta
gagaagtttttcaaaggatttggccacattcgggaggtcaatctaaaaaacggctttggc
tttgtggagtttgatgaccacagagatgctgatgatgcagtctatgaactgaatgggaaa
gaactgtgcaatgaaagggtcacaatcgagcatgcccgctctcccagagggagaggaggt
ggaggagctggaggaggaggaggtggaaggttttctccgcggtttagcagctatcgtcag
actcgtggctcaatgtatggtcctcctgtgcgcacagagcacagaatcattgttgagaac
ctctcttcccggataagttggcaggatctgaaggatatgatgaggaaggttggtgaagtc
acatttgtggatgcacacagatccaacaagaatgaaggagtggtggaatttgcttcacgc
agcgatatgaagaacgcccttgataaactagatgggactgaacttaatggacgcaaactc
aaactgactgaagatcgcaagaggaagagcagaagccgctcccgctccaggagttacacc
aggtctcgcagtcgttcccgatccaggagccgttccaaatccccgagcaggagccgaagc
aggaatcgcagccgtaccaggtcccgctcagtcagccacagcccagagaggaaacccctt
ccccgagctgccccgcactccccctctcgctccaagtctcgatcccactctcgctccaag
tctcgatcccgatcccctccagtacagaagaggcagtctagatccaggtcccaatcgact
gagagcaggcactga
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