Polyodon spathula (Mississippi paddlefish): 121324799
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Entry
121324799 CDS
T07273
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121324799
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121324799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121324799
Spliceosome [BR:
pspa03041
]
Common components
Common spliceosomal components
SR proteins
121324799
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
121324799
NCBI-ProteinID:
XP_041122915
LinkDB
All DBs
Position
12:17980659..17989171
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AA seq
281 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFRGFGHIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCNERVTIEHARSPRGRGGGGAGGGGGGRFSPRFSSYRQTRGSMYGPPVRTEHRIIVEN
LSSRISWQDLKDMMRKVGEVTFVDAHRSNKNEGVVEFASHSDMKNAIDKLDGTELNGRKL
KLTEDRKKNRSRSRSRSYTRSRSRSRSRSRSKSQSRSRSRKHSRTRSRSLSHSPERKPLP
RAAPRSPSRSPSRSKSRSHSRSPPVQKRQSRSRSPSAESQH
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtgtcgagtgttcatcggccggctgagcccccacgccagagagagggacgta
gagaagtttttcagaggattcgggcacattcgggagatcaatctgaaaaacggctttggc
tttgtggagtttgatgaccacagagatgctgatgatgcagtctatgaactgaatgggaaa
gaactgtgcaatgaaagggtcacaatcgagcatgcccgctctcccagggggagaggaggt
ggaggagctggaggaggaggaggaggaaggttctctccgcggttcagcagttaccgtcag
actcgcggctcaatgtatggtcctcctgtgcgcacagagcacagaatcattgttgagaac
ctctcgtcccggataagttggcaggatctaaaggatatgatgaggaaggttggtgaagtc
acatttgtggatgcacacagatccaacaagaatgaaggagtggtggaatttgcttcacac
agcgatatgaagaacgcaattgataaactagatgggactgaacttaacggacgcaaactc
aaactgactgaggatcgcaagaagaacagaagccgctcccgctccaggagctacaccagg
tctcgcagtcgttcccgatccaggagccgttccaaatcccagagcaggagccgaagcagg
aaacatagccgtaccaggtctcgctcgctcagccacagcccagagaggaaaccccttcct
cgggctgcccctcgctccccctcccgctccccgtctcgctccaagtctcgatcccactcc
cgatcccctccagtgcagaagaggcagtccagatccaggtccccctcggctgagagccag
cactga
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