Polyodon spathula (Mississippi paddlefish): 121324815
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Entry
121324815 CDS
T07273
Name
(RefSeq) PDZ and LIM domain protein 4-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121324815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121324815
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121324815
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Ortholog
Paralog
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GFIT
Motif
Pfam:
DUF4749
LIM
SNAPC3
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
121324815
NCBI-ProteinID:
XP_041122952
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All DBs
Position
12:complement(34608943..34628001)
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AA seq
277 aa
AA seq
DB search
MTHMGAQNRIKACADQLILSINRSETKTWSPTVTEDSRANPFKFSLESEPQDFGPFRSGH
NRRPAPFAHDGPMNNGNSKPNAQYNNPMGLYANNNINNETSLPKQMGRLNITSPQSPEPQ
VPSPNTRNGVDTESDVYKMLQHTDYESSSEPKQSGSFRYLQGILDAEDTGEKPERPAITK
SVKSPVHKLGGSVPGLQKLPECTRCGNGIVGTIVKARDKLYHPECFMCDDCGLNLKQRGY
FFIEEQLYCENHAMARVQPPEGYDVVAVYPNSKVELV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgacacatatgggggctcagaacaggatcaaggcatgtgctgaccagctcattctatca
atcaacaggtccgaaacaaagacttggtctccaactgttacagaagacagcagagcaaat
ccttttaaattcagcttggagtcagaacctcaggattttgggcctttcagaagtggacac
aacagaagaccagccccctttgcgcatgatgggcctatgaataatggcaattcaaaacca
aatgcccagtacaataatcccatgggactttatgcaaacaacaacatcaacaacgaaacc
tctttgcccaagcaaatgggcagactcaatatcacttctccacagagtccagaaccacag
gtgccttccccaaacaccagaaatggtgttgacaccgagtctgacgtctacaagatgctt
cagcatactgattatgagtcatcgtcagaaccaaagcagtctgggtccttccgatactta
cagggaatacttgatgctgaggatactggtgaaaaaccagaaaggccagccatcaccaaa
agtgtgaaatccccagtacataaactgggtggcagtgtgcctgggctgcagaagctccct
gaatgtaccagatgtgggaatggcattgttggtacaatagtaaaagcacgggacaagctt
taccaccccgagtgctttatgtgtgacgactgtggcttgaacctgaaacagcgcgggtat
ttcttcattgaagagcagctgtactgtgagaaccacgcaatggccagagtccagcctcca
gagggttatgatgttgtagcggtttaccccaactctaaagttgaactggtctaa
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