Polyodon spathula (Mississippi paddlefish): 121324816
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Entry
121324816 CDS
T07273
Name
(RefSeq) rho GTPase-activating protein 23-like
KO
K20315
Rho GTPase-activating protein 21/23
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121324816
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Others
Others
121324816
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121324816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PH
PDZ_6
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121324816
NCBI-ProteinID:
XP_041122953
LinkDB
All DBs
Position
12:complement(43047419..43076961)
Genome browser
AA seq
1718 aa
AA seq
DB search
MSGGRAAVAWPATGASRWSFEHPVGVDCSDPEPRCIWLAILRSVSKVKHSKTGAQGTLPP
PRSQERKQQPAKGRRDGAASSNENAQPASGDGLQWPGPRSLVLHKNAQGFGFTLRHFIVY
PPESAVHNSPTDEENGNGKGYQKGRLEPMDTIFVKNVRERGPAHMAGLCTGDRLVKVNGE
SILGKTYSQVIALIQNSDSILELSIMPKDEDVLQLAYSQDAYLRGNDPFRGGAQNLPEPP
PICYPRKTYPGIPPQNQPPQHLDNWPCRSGSQGPSPPLDNRTGGEPGGVGPSSPAHRTEE
VQYGMTCRGGGVRSVSSSSSATSPPPHQNHSAGRPLAPAQPPRQGSSPRAGSETRLPSPQ
QPQPQPAPARRQAQLCQQALSDWYYSQQGPHRPPSHPAMPPRHRSFSHDRLGDPPPLSHF
RGPHSASQDFLLHQHHWGHPSGPPSVIGDSCWSDAGRTRSENQLASRRELHGRSLETLDR
AVMSPRLEHPTWLQRQHSRTSVGTSAPSNRERAQPQPQQPAQPGSRERGREVPRLPPQQS
FEDPLVGYRSYSPSFYRKTDLLLNAHSFRDPSYAGPRLNWTPTPKTSPPGDPETDATSTP
PLPLPPVQDVVRRPTNHERGVGGGGLREDVSQIQQQQEVVLRQKPPIGRRTSYGFRHPHY
ALPTDPQDSPAQIGATQGDTGPCSANRGLPPLPIDDDSLASIPFIDEPTSPSADLRARHV
PASSVVSSAISSAPLITTSPASPTFTFPLTRLFSHDCSSIKASRRSSYLLAITTERSKSC
DEGLNTFRDEGRVFSRLPKRVKSFFTDGSLDSLGAAQDIRSKRHSTSELSNLTFSDVRRE
GWLHYKQILTEKGKKAGSGMRPWKRVFSVLRSHALFLYKDKREAVLFNTAHSEDEQPISI
RGCLVDIAYSETKRKHSLRLTTQDFCEYLLQAEDRDDMLGWIKGIRENSRTSGEDSGFCG
QALINKKLNDYKKQSPTGSKPDSPKGTRMKPPFLTATGAPRSPRHDSGNKEDSSPPKSPW
GINIMKKVKKSVPKVFGVRLEDCQHGVNEKFVPLIVELCCGLVEEMGLEYTGIYRVPGNN
AVVCSLQEQLNKGSIDINPADEKWQDLNVISSLLKSFFRKLPEPLFTDDKYNDFIDANRM
EDAGERLKTMKKLIRDLPDYYFHTLKFLVGHLKTVADHSDKNKMEPRNLALVFGPTLVRT
SEDNMTDMVTHMPDRYKIVETLIQHHTWFFSEETDKDDKTPVDKADMQPAPNIDHLLPNI
GRTGVLAEASDSTNSDSAKSKGSWGSKRELYSKELLALSILSAVTRKRKKRQDARVRGNS
TDEDSEHEPIKEGAGREEEETRGERQGDDPRSQEEEEEQCRAPEAAKERPPPDARSIVSG
YSTLSTLGERGGEEADDERSELLSESGGGLPETDTESGFASHPQTQERPPKQDRRRRGQE
QEKLSQQLSQQLSKLPAPAPPSSFLYSHCRLGATGGEGGPRSDTPSSLSSSTSTSSTAPR
LHNRPSFNSRRLIQCDTLARKKLRGGEKGLPRPPGPEKDTGGCVRSSLGEEAVVAVDTAD
SADSSKVSVPRIVCSNQERLGGELGGERRVNEAASFSPASVGKPLPRPRSSADDMFGVGL
RKPHSPETRRKKKAWRRHTVVVNTSSMSDPQSGKRLSDPCSEGRPRSGSYGSRPQPPQDS
KPARTSSVDLPPPYPHPHSSAPSSTPQHTVASRFHLYL
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggggcgcgctgccgtggcctggccagctactggggccagcaggtggagtttt
gagcatccggtgggggtggactgtagcgaccctgaaccccgctgcatctggctggctatc
ctgcgcagcgtcagcaaggtgaagcactccaaaacaggggcgcaggggaccctccctcca
ccccgcagccaggaacgcaagcaacagccggcgaaggggcggagagatggggctgcctcg
tccaatgagaatgcacagccggcctctggggatggactgcagtggcccggcccacgctcg
ctggtactgcacaagaacgcccagggattcgggttcacgttgcggcacttcatcgtgtac
ccgccggagtctgccgtgcacaacagccccacggatgaagagaatggaaatggaaaagga
taccagaagggtcggctggagccaatggacacaatcttcgtgaaaaatgtgcgtgagaga
ggccccgcccacatggcaggactttgcacgggggaccggctggtgaaggtgaatggagag
agtattctgggtaagacctactcccaggtcatcgcactgatccaaaacagtgacagtatc
ctggagctctccatcatgcccaaagatgaagatgttttacagctggcatactcgcaggat
gcctatctgagagggaatgacccattccgcggaggagcccaaaacctgcctgaacctcct
ccgatctgctatccgcgcaaaacctacccggggatcccaccccagaaccagcctccgcag
cacctggacaactggccctgccgctcaggctcccaggggccctcgccccccctggataac
cgcacgggaggggagccggggggagtgggaccctccagcccagcccacagaaccgaggag
gtacagtacgggatgacctgccggggtgggggtgttcggtctgtctcctcttcctcctct
gcaaccagcccaccgccgcaccagaaccacagcgcggggcgccccctcgcccctgcccag
cccccaaggcagggcagctccccccgggctggcagcgagacccgcctcccctcccctcag
cagccccagccccagccagcccctgctcgcaggcaggcccagctctgtcagcaggctctg
tcggactggtattacagccagcaggggccccacaggccccctagccaccctgccatgccc
ccgcgacatcgcagcttctctcatgacagacttggggacccccctcccctcagccacttc
cgggggccccacagtgcttcgcaggacttcctcctccaccaacaccactggggccacccc
tctgggcccccgagcgtgattggggactcctgctggagcgacgcaggcaggacgcgctcg
gagaaccagctggccagcagacgggagctccacggccgctcgctagagaccctggaccga
gcggtgatgtcccccaggctcgagcacccgacctggctgcagcgccagcacagcaggacc
agcgtgggaaccagcgcccccagtaacagggagagagcccagccccagccccagcagcca
gctcagccgggcagcagggagagggggagggaggtgcccaggctgcctccccagcagagc
tttgaggaccccttggtgggctaccgcagctacagcccctccttctaccgcaagactgac
ctgctcctcaatgcacactccttcagggacccctcctatgcagggccccgcctcaactgg
acgcccacccccaaaaccagccccccaggggatcccgaaactgatgccacctccactcct
ccccttccccttcccccagtccaggacgtggtgcggagaccgaccaatcatgaacgagga
gtgggagggggagggctgagggaggacgtgtctcagatacagcagcagcaggaggtggtt
ttgagacagaagccccccataggccgacgcacatcttatggattcagacacccccactac
gccctgcccactgacccgcaggactcccccgcgcagataggggctacccagggggacacg
gggccctgcagcgccaacaggggtctcccgccgctacccatagacgatgactcgctggca
tccatccccttcatagacgagcccacgagtccgagcgctgacctgcgagccagacatgtg
ccggcctcctccgtggtgtcgagtgccattagctccgctcccctgatcaccacgagcccc
gcctcccccaccttcaccttcccgctgaccaggctcttctcgcatgactgcagcagtatc
aaggccagccgccgctcctcctatctgcttgctatcacaacggagcgctccaagtcatgt
gacgagggtctcaacaccttcagggatgaaggccgagtcttctcgaggcttccaaaacga
gtgaagagctttttcacagacgggtctctggacagcctgggtgctgcgcaggacattcgc
tcgaagcgccattccacctcggagctcagcaacctgaccttcagcgacgtgcgcagggag
ggctggctgcactacaagcagatcctcaccgagaagggaaagaaggcaggcagcgggatg
cgtccctggaagcgagtgttctctgtgctgcgctcgcatgcgctcttcctctacaaggac
aagcgagaggctgtgctcttcaacacagcacactcagaggacgagcagccaatcagcatc
cgcggctgcctggtggacatcgcgtacagcgagacgaagcgcaaacactctctgcggctc
accacgcaggacttctgcgagtacctgctgcaagccgaggaccgcgacgacatgctgggc
tggatcaaggggatccgcgagaacagcaggaccagcggggaggattctggtttctgcggt
caagcgctgattaacaagaagctgaacgactataagaagcagagccccacaggcagcaag
cccgactctcctaaagggacccgaatgaagccccctttcctcacggcgacgggggcgccc
cgatcccccagacatgactccgggaacaaggaggacagcagcccccccaagtctccctgg
gggatcaacatcatgaagaaagtgaagaaatcggtacccaaagtgtttggggtgcggctc
gaggactgccagcacggggttaatgagaagtttgtccccctgattgtagagctgtgctgt
ggcctggttgaagagatgggtctggagtacactggtatctaccgggtcccaggaaacaat
gctgtggtatgcagcctacaggagcagctcaacaagggcagcattgacatcaaccctgcc
gacgagaaatggcaggacctgaatgtgatcagcagtctgctcaagtctttcttcagaaag
cttccagagcccctctttactgacgacaaatacaatgatttcatagacgctaacagaatg
gaggacgcaggagagagactgaaaacaatgaagaaactgatccgagacctgccagattat
tacttccacacactcaagttcctagtcggtcacctcaaaacagtggctgaccactccgat
aaaaacaagatggagcctcgtaacctggccctggttttcggccccacgctggtcaggact
tcggaagacaacatgactgacatggtgactcacatgccagaccgctacaagattgtggag
accttgatacagcaccacacctggttcttcagtgaggagacggacaaagatgacaagact
ccagtggacaaggcagacatgcagccagcgcccaacattgaccacctcctgcccaacatc
gggaggactggggtgctggcagaggcctcggattcaaccaacagcgactcagctaaatct
aagggctcgtgggggtcaaagcgggagctgtactccaaggagcttctggccctgtccatc
ctgtcggctgtgacccgcaagcgcaagaagcgccaggacgccagagtccggggcaacagc
accgacgaggactcggagcacgagccaatcaaagaaggagcaggaagagaggaggaggag
actagaggagaaaggcagggagatgatcccaggagccaggaggaggaagaggagcagtgc
agagccccagaggcggcgaaggagaggccccccccagacgctcgctccatcgtttcgggg
tactccacactgtccacgctgggggagcgtggaggggaggaggcggatgacgagcgcagt
gagctgctgagtgagagtggaggggggctgccggagactgacacggagagtggctttgcc
tcgcacccccagacacaggagagaccccccaagcaggaccgccggaggaggggccaggag
caggagaagctctcccagcagctctcccagcagctcagcaagctccctgcccccgccccc
cccagcagcttcctgtactcgcactgcagactgggagccacagggggggaggggggcccc
cgctcagataccccctcctccctctcatccagcacctccacctccagcacggctccgcgg
ctgcacaaccggccctccttcaactcccgcaggctgatccagtgcgacacgctggcccgc
aagaagctgcgtgggggggagaaggggctgccgcggcccccgggtccggagaaagacaca
ggtggttgtgtgcggtcctcgctgggggaggaggcagtagttgccgtggacactgcagac
agtgccgacagtagcaaggtctccgttcccaggatagtgtgcagcaaccaggagaggctg
ggcggggagctggggggggagcgcagggtgaacgaagctgcctctttctccccagcctca
gtagggaagcccctccccagacctcgctcctccgcggacgacatgttcggcgtgggcctg
cgcaagccccactcccctgagacgcgccgcaagaagaaggcgtggcgccggcacacagtt
gtggtgaacaccagcagcatgtccgacccccagagcggcaagagactgtctgacccctgc
agtgagggtcggccgcgctccgggagctatggcagccgccctcagcccccacaggacagc
aaacctgcccgcaccagctctgtggacctgccacccccctacccccacccccacagcagc
gccccgagctctacgcctcagcacacagtagcctcccgctttcacctgtatctctag
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