Polyodon spathula (Mississippi paddlefish): 121324845
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Entry
121324845 CDS
T07273
Name
(RefSeq) VPS10 domain-containing receptor SorCS2-like isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121324845
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Others
Others
121324845
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
DUF6786
Motif
Other DBs
NCBI-GeneID:
121324845
NCBI-ProteinID:
XP_041122995
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All DBs
Position
1:96648197..96929800
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AA seq
1130 aa
AA seq
DB search
MAQSGTSLFLKGTLSINVYFGLVLASVWMSLLGPVKSDSGFVKRTGRDWFLDSRGGVLGR
SAAVDGAHARTRAARFRRALSQDKVDLLSSSFVLKGDATHNQAMVHWTGENSSVILILTK
YYHADTAKVLESSIWRSTDYGTTYTKLNLLPGTTIVVTNFYICPTNKKKIILVSTSINDR
DPMLFISTDEGTNFQRQPLTFSVETLVFHPNEEDKLLAYSKEKRLYVSTDLGRKWTLLQE
RVTKGRFFWSVARVDADPDLIHMEMQDTSGGFLYMTCLIQNCSDKMVTAQFLGKIDHNSL
SVQDDYIFVKVSTGNRTKHYVSYRRNEFVQMKFPKYALLKDVQIVSTDENQVFLALQEWY
QTDTYNLYQSDPQGVYYSIVLENIRSTKQPEENVLLDILEVRGIKGVFLANQKVNGKVTT
LITYNKGRDWDYLNPPSTDMNGKPVNCKPPDCHLHLHLRWADNPYVSGTVHTKDSAPGLI
MGAGNLGSQLVEYKEEMYITSDCGKSWRQVFEEEHHILYLDHGGVIVAIKDTSIPLKILK
FSIDEGWTWTTHNFTSTSVFVDGLLNEPGDETLVMTVFGHISFRSDWELVKVNFQQSFPR
QCTEADYDAWKLTNLKGEVCIMGQERSFRKRKDSAFCIKGKSFTSALTSRPCQCTEKDFN
CDYGFERAASLKSEGDRCFADFWHDPDSPPDDCIIGHSYASSTGYRKVVSNICEGGVNKQ
QSSKQHTCPLLAPRGLQLETKGETLAVGPGDDITFIVRQEQGDTVNTKYQVDLGDGFRAI
YVNLTVTDEPIQHRYEKPGIYRVTVKAENTAGHDEAMVYIQVNSPLQEVHLEVVPIAERN
QDVNLTAVMLPAATNLTVFYWWIGDNLQPILSLENSLITKFPKTGEVMVTVQAACGRSMV
QDTKTMRVFDQFQVLPLTFSKSLDPFNPNTPEWREDIGQVVTRILAKITDIPQASLVTVV
KPDIPTTADLYVLPPESTPEKKRSTPVDKRIPAIKQALNGNNVSFIVRGGLVVLVNLADS
DSESQRSGVGGGFWAVAVIFVVCLVAVGSFILYKFKRKLPGRNVYAQMHNVKEQEMTSPV
NHSEDTQNIIQGEEFIDDDLDSQTLGNAGGNHSGVVLSINSRELHSYLTS
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaagtgggacatctctttttctaaaagggaccctctccattaacgtttacttc
ggcttagtgttggcttccgtgtggatgtcactgctgggacccgtgaagagtgacagcggt
tttgtaaaacgaactggccgagattggtttcttgacagccgcggcggtgtgcttggaaga
agcgctgctgtcgatggagctcatgctcgtacgagagccgcacgcttcaggagagcacta
tcccaagataaagtagacctgcttagcagctcgttcgtgttgaaaggagacgcgacacat
aatcaggcaatggtgcactggaccggggagaacagcagtgttatattgatcctgaccaag
tactaccatgcagacactgccaaggttctggaaagttccatttggaggtccactgattat
ggaacaacctacaccaagctgaatctgctgcctggcacaactatagtcgtcaccaacttc
tacatctgtcccacaaacaagaagaagatcattcttgtgagtacttccattaatgatcgg
gacccaatgctttttattagcacagacgagggaaccaactttcagagacagcctctcaca
ttctccgtagagactctggtcttccatccgaatgaagaagacaaactactagcctacagc
aaggagaaaaggctctatgtatcaacagacttaggcaggaagtggactctgctacaagaa
cgagtgacaaagggtcgctttttctggtctgtagccagagttgatgctgatcctgatctt
atacacatggaaatgcaggataccagtggaggtttcctctacatgacctgtctgattcag
aattgctctgacaaaatggtgactgctcaattccttggcaagattgaccataactcactc
tctgtacaggatgattacatttttgtgaaggtgtcaactggaaatcgaaccaagcactac
gtttcttaccgtcggaatgaatttgttcagatgaagtttccaaagtatgccttactaaag
gatgtgcagatagtcagcacagatgagaaccaagtgttcctcgctctccaggagtggtac
cagactgacacctacaacctctaccaatcggacccacagggtgtatactattccattgtg
ttagagaacatcaggagcacaaagcagccagaagaaaatgtcctccttgacatcttagag
gtacgtggaattaaaggagtctttctggccaatcaaaaagtgaatgggaaggtgaccaca
ctcatcacctacaacaagggccgtgactgggactaccttaatcctccgtccacggacatg
aacgggaaaccagtaaactgcaaaccgccggattgccatcttcacttgcatctccgttgg
gcagacaatccatacgtgtcagggactgtgcacaccaaggactctgcaccgggactgatc
atgggggctggcaatttgggctctcaattggtcgagtacaaagaagaaatgtatattact
tccgactgtgggaaatcctggagacaggtatttgaagaagaacaccacattctgtaccta
gatcacgggggcgttatcgttgccattaaggacacttccatccccctcaaaatactcaaa
ttcagcatagatgaaggctggacttggacgacacacaatttcaccagcacctcagttttt
gtggacgggcttctgaatgaacctggagatgagactcttgttatgacggtttttggccat
ataagtttccggtcagactgggagttagtaaaggtgaactttcaacagtcttttcccaga
cagtgcacagaggcagactacgatgcatggaaactaaccaaccttaagggggaggtgtgc
attatgggtcaggagaggagtttccggaagagaaaagattcagcattttgtatcaaaggg
aagagtttcacttcagccttgacctccaggccctgccagtgtacagagaaggattttaac
tgtgactatggctttgaacgggcagccagtctgaagtctgaaggtgatcgatgcttcgct
gacttctggcatgaccctgactcccctcctgatgactgtatcatagggcattcctatgcc
tccagcactggctacaggaaagtggtatctaatatctgtgagggaggagtaaacaaacag
cagagttccaaacagcacacgtgtcctctgctggcccccagaggtctgcagcttgaaacc
aaaggagagaccctggctgtgggccctggagatgacatcaccttcattgtgaggcaggag
cagggagacactgtaaacaccaagtaccaggtggatctaggtgatgggtttcgagccatc
tatgtgaacctgacagtgactgatgaacctattcagcaccgctatgagaagcctggtatc
taccgggtcactgtgaaggcagagaacacagcaggacatgatgaggctatggtctacatt
caggtcaactctccccttcaggaagtgcatttagaagtggtgccgatcgctgaaaggaac
caggatgttaatttgacagcagtgatgctccctgcagctaccaatctgacagtcttctac
tggtggatcggagacaatctccagcccattctctccttagagaacagcctgattaccaaa
ttcccaaagaccggtgaagtgatggtgacagttcaggcagcctgtggaaggtccatggtc
caggataccaaaacaatgagggtgtttgatcagttccaagttcttcctctcacattcagc
aaaagcctcgatcccttcaatccaaacacccccgaatggagagaggacatcgggcaggtt
gtcactagaatcctagcaaagataactgacattccacaggcatccctggtgactgtggtg
aagcctgacattccaaccacagcagacttgtatgtgcttccaccagagagtacaccagag
aagaaaagaagcacaccagtcgataagaggatacctgccataaagcaggctcttaacggg
aacaatgtgagcttcatagtgagagggggcctggttgtgctggtaaacctggcggattct
gattcagagtctcagcggagcggtgtaggtggtggattctgggctgtggcagtgatcttt
gtagtctgcttggttgcagtaggatcgttcattctctacaaattcaaaagaaaactccct
ggtagaaacgtctacgcacaaatgcacaatgtaaaagaacaggaaatgaccagtcctgtc
aatcacagcgaggacacccagaacatcatccaaggggaggagtttattgatgacgatctc
gattcccaaacattaggtaacgctggaggtaatcactcgggggtagttctgagcataaac
tccagagaactgcacagctacttgaccagctga
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