KEGG   Polyodon spathula (Mississippi paddlefish): 121324900
Entry
121324900         CDS       T07273                                 
Name
(RefSeq) interferon alpha-13-like
  KO
K05414  interferon alpha
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060  Cytokine-cytokine receptor interaction
pspa04217  Necroptosis
pspa04620  Toll-like receptor signaling pathway
pspa04621  NOD-like receptor signaling pathway
pspa04622  RIG-I-like receptor signaling pathway
pspa04623  Cytosolic DNA-sensing pathway
pspa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    121324900
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    121324900
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    121324900
   04621 NOD-like receptor signaling pathway
    121324900
   04622 RIG-I-like receptor signaling pathway
    121324900
   04623 Cytosolic DNA-sensing pathway
    121324900
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    121324900
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:pspa04052]
    121324900
Cytokines and neuropeptides [BR:pspa04052]
 Cytokines
  Interferons
   121324900
SSDB
Motif
Pfam: Interferon DUF4817 DUF4179
Other DBs
NCBI-GeneID: 121324900
NCBI-ProteinID: XP_041123035
LinkDB
Position
12:42268048..42282552
AA seq 267 aa
MLESVFLSARIPQSRSEKSNGWQNGFKQHILVDVFFASTSSVKTETTALIAYNVLSHVLR
LFDETLTPVSWDLSKLRHFKNTLFRQTEKLEECMEGQTPFVGVLNSFADRSELLKTYFEN
MENVLKDKGGNFPVQCKKENVAIAVPLDAYEITEDSQIEDIKMTIYEVLNDVNKIFLSGP
KPASWNKTNLDNFHNNLHRQIHGVKQCVQVRAGAPQGSHLVLKAYFKKLQNVLQDKDYSF
CAWEIVRKEAVNTLTQVQLLMDKAEIE
NT seq 804 nt   +upstreamnt  +downstreamnt
atgctagaaagcgtattcctcagtgcgagaataccacaaagcagaagcgagaaaagcaac
ggctggcagaatgggttcaagcagcacattttggtggacgttttctttgcatcaacctcg
tcagttaagactgagacaactgcattgattgcatataacgttctgagccacgtcctcaga
ctttttgacgaaactcttacacctgtgtcttgggacctctcaaagctgcgtcacttcaaa
aataccctattccgtcagacagagaagcttgaggaatgcatggaaggtcaaacacctttt
gttggggtcttgaactcctttgccgaccgcagcgagcttctgaagacctactttgaaaat
atggaaaatgttttaaaggacaagggaggcaattttcctgtgcaatgcaaaaaagagaac
gtagcgattgctgtgccgctggatgcctatgagattacagaggactcccagattgaagac
atcaagatgacgatttatgaggtattaaatgacgtcaacaagattttcctgagtgggccg
aagcctgcaagctggaataagactaatctggataactttcataacaaccttcatcgccag
attcacggagtaaaacagtgtgtgcaggtcagagctggagcgccacaaggcagtcacctg
gtgctaaaggcgtattttaagaaactgcaaaatgttttacaagacaaggactacagtttc
tgtgcttgggaaattgtaagaaaagaagcagtaaacactttaacccaagttcagctgctc
atggacaaagctgagatcgagtaa

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