Polyodon spathula (Mississippi paddlefish): 121324931
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Entry
121324931 CDS
T07273
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pspa04054
]
121324931
Pattern recognition receptors [BR:
pspa04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121324931
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_9
DUF1647
Motif
Other DBs
NCBI-GeneID:
121324931
NCBI-ProteinID:
XP_041123071
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All DBs
Position
12:37293206..37299738
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AA seq
962 aa
AA seq
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MGAPKGSVSGIHFLFLASLVYDLVLILPTSGFSLMNCTVHSSPNATNLKVRCFNKKFYHV
PTDKPAKTRLLDISGNLISELRRGDFTNLMYMRELNISHNQIHHIDEGTFRDLVALKELN
LAENNLSILCGRLFEGLKNLTVLQLGGNRIQEIQQSTFQPLVNVKVVNLSFNALHQPQRV
QPVFRASGLERLYVGGNQFQSFNTEDFVKAPVHLKALDMSYNPFTHFNIASDIFPGLMVL
NLSYSGSQNGLRWELRNKTFVKGVKELYLNGFHMTIQGILSVIKNFTNSSLEDLQLNNLN
FSQAVHILKDICLLLPKLKSLSLQGNSISILEDSTFVNCSSPNHLDLSRNSLRNLSDMSF
RAMPQLHLLVLSYNQLNTVPNATQNLTSLVTLDLSYNLIETLQSYDFKGLRRLSCLNLRG
NYIIILNKLLFTDLVNLQDLKLHNNLILDIPEPLAPSLRNLKTLNLGVNKLSIIKNATFL
NLNSLRILYMSTNQISVIEEGAFSGLTKLRTLHLGNNKLTKNTFRGENVFTGMPTLKILM
LYNNHINYEKSDELEHPPFVALKSLTHLSFNSQGPKGILHLPSNFLKELSLLRILYAGSL
SLSSLHPDTFSYTPLLTYIDLNSNPLAFIDPRIFQNMSALEILYLDKMRLQSLDFLINAN
LTKVKFLSAMENEFNTLNKSHIQSLPSLKLLKLSLNPFTCGCVNAWFQNWSLQDTNTQVL
DLYQLSCGYPPTLRNSRLADFKFDSCALDLEFIFFVSTSTLVTLTMVTSFIYHFLRWQVV
YAYHLFQAFLYDRKQKPSRRYEFDAFVSYNAHDEPWVLRELLPNLEQGRGWKLCLHHRDF
QPGKPIIDNIVDNIYKSRKTLCIISRHYLESEWCSREIQVASFRLFDEQKDVLVLVFLED
IPDCQLSPYHRMRKLVKKKTYLNWPKCEEETRLFWHKLNTALETREEPDEENPILTGLET
PD
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcccctaaaggcagtgtgagcgggatccacttcctcttcctagcctcactagtg
tatgatttagtgctgatattgccaacgtcaggcttctccctgatgaactgcactgttcat
agttccccaaatgccacaaacctgaaggtgcgctgctttaataagaaattctaccacgtg
ccaactgataagcctgccaaaacaaggctcctggatatatcagggaacctcatctcagag
ctacggagaggagatttcacaaacctgatgtatatgagggagctgaacatatctcacaat
cagatccaccacatagatgaaggcaccttcagggacctggtcgctctgaaagagctcaat
ctggcagagaataatttgagcatcctgtgcgggagattgtttgagggtctgaagaacctg
actgtgttgcagctgggagggaatcgcatacaagagatccaacaatcaaccttccagccc
ctggtcaatgtcaaggttgtgaacttgagcttcaatgcacttcaccaaccacagagagtc
cagcccgtgttcagagcatctggtttggagaggctctatgttggaggcaatcaatttcaa
agttttaacaccgaagattttgttaaagctcccgtacacttgaaagcgctcgacatgtcc
tacaacccttttacacattttaatattgcaagcgacatctttccagggctcatggttttg
aacctgtcttattcaggttcacagaatgggctacgctgggagttaaggaacaaaacgttt
gtaaagggagtgaaggaactgtatttgaatggctttcacatgacaatacaagggatttta
tcagtgataaaaaacttcaccaattcgtcactggaagatctacagcttaataacttaaac
ttcagccaagctgttcatattttgaaagacatctgcctcttgctccctaaactaaagagt
ctcagccttcaaggtaacagcatatccattctcgaggacagtacgtttgtcaattgctcc
tcgccaaaccatttggatttatcgaggaatagtttgaggaacctatcagatatgtctttc
agagccatgccccagttgcatctcctagtactgtcctataaccagctgaacaccgtcccc
aatgcaacccagaacctcaccagcctggtaaccttggacctcagctacaaccttattgag
acgctacagagctatgatttcaaaggcttgagaaggctgagctgcctcaatctgagaggg
aactacatcatcatactcaacaaattgttattcaccgacctagtgaacctgcaagacctg
aagcttcacaacaatctgatcctggatatcccggagccactggcacctagcttgcgtaac
ctgaagaccctgaatctaggggtcaacaagctgagtatcatcaagaatgccaccttcctt
aacttgaattcactgaggattctttacatgtcaaccaaccagatttcagtcattgaggag
ggggctttcagtgggctgacgaagctcagaacgttgcacctggggaacaataagctgacc
aagaacactttcagaggagagaatgtcttcacagggatgcctaccctaaagattttgatg
ctgtataacaaccacattaactatgagaagtcagatgagctagagcaccctcctttcgtt
gctctgaagtccctgactcacctatccttcaacagtcagggtcccaagggtatattgcat
ttgccttctaactttctgaaggagctgtctttactcaggatactgtatgctggcagcctg
agcctgagttctcttcatccagatacattcagctacacacctcttttaacttacatagac
ctcaacagtaacccactcgcttttattgaccctagaatcttccagaacatgtcagccctg
gaaatattgtacctggacaaaatgcgtctgcagtcactggatttcctgattaatgccaac
ctcaccaaggtcaagttcctatcagcaatggaaaacgagtttaacacactaaacaagtct
catatccagtccctcccctccctaaagctgctcaaactatctctgaaccccttcacctgc
ggctgtgtcaatgcctggttccagaactggtccctgcaggacactaacacccaggtcctg
gacttatatcagctctcctgtgggtaccctccaaccctgcgcaacagcagactggctgat
ttcaagtttgactcctgcgctcttgacctggagtttatcttttttgtctcaacttccacc
cttgtgactctaaccatggtgacctccttcatttaccacttcctccgctggcaggttgtc
tatgcctaccatctcttccaagcattcttatatgacaggaagcagaagccgtcccgacgt
tacgagtttgatgcctttgtttcgtacaacgctcacgatgagccttgggtcctgagggag
ctgctgcccaacctggagcagggccgtggctggaagctgtgtctgcaccatcgagacttt
cagcccggcaagcccataattgacaacatcgtggacaacatctacaagagccgcaagacc
ctttgcatcatcagccgccactacctggagagcgagtggtgctccagggagatccaggtg
gccagcttccgtctctttgacgagcagaaggatgtgctggtcctggtgttcctggaggac
atccctgactgccagctctccccctaccacaggatgaggaagctggtgaaaaagaagacc
tacctgaactggcccaaatgtgaggaagaaaccaggctgttctggcacaagctgaacaca
gcactggagacccgagaagaacctgatgaagaaaatccaattctaactggcttagagact
cctgactga
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