Polyodon spathula (Mississippi paddlefish): 121324989
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Entry
121324989 CDS
T07273
Symbol
nkx2.1
Name
(RefSeq) homeobox protein Nkx-2.1
KO
K09342
homeobox protein Nkx-2.1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121324989 (nkx2.1)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121324989 (nkx2.1)
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121324989
NCBI-ProteinID:
XP_041123187
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Position
12:complement(12594141..12596575)
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AA seq
344 aa
AA seq
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MSMSPKHTTPFSVSDILSPLEESYKKVSMEGNNLGAPLSVYRQSHVSQASMQQQHHMGHN
GTVPATYHMAAAGVPQLSHSSMGGYCNGNLGTLGNMSELPPYQETMRNSASATGWYGANP
DPRFSSISRFMGPSSGMNMSGMGSLGSLADVGKGMGPLQSTPRRKRRVLFSQAQVYELER
RFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKVTQQQMQQEASSCQQ
QQQSPRRVAVPVLVKDGKPCQGGTHTPTTGAQNHHHQQTTSATNNSGIGQHQQTGSACHS
PDLGHSSSPPSLHSQVSSLSHLNSSGSDYGTAMQCSALLYGRTW
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgagccccaagcatacgactcctttctcagtttctgatatcttgagtccccta
gaggagagttacaagaaagtgagcatggagggcaacaacttgggggctcccctgtcagtt
taccggcagtctcacgtctctcaggcatccatgcagcagcagcaccatatggggcataac
gggacggtgcccgccacctaccacatggcagcggcgggtgtacctcagctttctcattca
tccatgggggggtactgtaacggtaacctgggcactctgggcaacatgagcgagcttccg
ccataccaggaaacaatgagaaacagtgcatcagccacaggatggtatggagccaatcct
gatccgcgcttttcttcaatttcccgcttcatgggcccatcctctggaatgaacatgagc
ggtatgggaagcctgggctctttggcagacgttggcaagggcatgggacctctgcagagc
actccaaggagaaagcgcagggtgcttttctctcaagcccaagtttatgagcttgaaaga
cgattcaagcaacagaaatacctctcggcaccggaaagagaacatttggccagcatgatc
cacctcactccaactcaggtcaaaatttggttccagaaccatcggtacaagatgaaacgc
caagccaaagacaaggtgacccaacagcaaatgcaacaggaggccagctcttgccaacaa
cagcagcagtctccaagaagagtggccgtacccgttttagtgaaggatggcaagccatgc
caaggaggcacacatactccaacaacaggcgcccagaaccaccaccaccagcaaacaact
agcgccacgaataattcaggaattgggcaacatcagcagactggtagcgcatgccattca
ccagatttaggccattcgtctagccctccctcccttcacagccaggtctccagtttgtct
cacctaaactcttctggttctgattatggcaccgccatgcagtgctctgctttattatat
ggtaggacctggtga
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