Polyodon spathula (Mississippi paddlefish): 121324990
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Entry
121324990 CDS
T07273
Name
(RefSeq) core histone macro-H2A.1-like isoform X1
KO
K11251
histone H2A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03082
ATP-dependent chromatin remodeling
pspa04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121324990
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121324990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121324990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121324990
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
121324990
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121324990
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Clp_N
Motif
Other DBs
NCBI-GeneID:
121324990
NCBI-ProteinID:
XP_041123188
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All DBs
Position
12:38218853..38231365
Genome browser
AA seq
372 aa
AA seq
DB search
MSSRGGKKKTTKTSRSTKAGVIFPVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEI
LELAGNAARDNKKGRVTPRHILLAIANDEELNQLLKGVTIAAGGVLPNIHPELLAKKRGS
KGKLEAIITPPPAKKSKLPPAKKTGPKRAGSKKGAGGKKKKQGEVSKAANADSTTEGPPA
DGFTVLSTKSLFLGQKLNLIHSEITNLAGFDVEAVINPTNADIDLKDDLGNALEKKGGKE
FGEAVSELRKKNGPLDVAGAALSPGFGLPAKFVIHCNSPGWGSDKCEELLEKTVKNCLAL
ADEKKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTMSSSIKTVFFVLFDSESIG
IYVQEMAKLDAN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccgaggaggaaagaagaagaccaccaagacatctcgctccacgaaggccggt
gtgatcttccccgtggggcgcatgctgcgctacatcaagaaggggcaccccaagtacagg
atcggggtgggggcgcctgtgtacatggcagccgtgctggagtatctcacagctgaaatc
ttagagctggcgggaaacgctgctcgggataacaagaaaggccgggtcactcccagacac
atcctgctggcgatcgccaatgatgaagagctgaaccagctgctaaaaggagttacaatt
gccgccggaggagttttacccaacattcaccccgagctgctcgccaagaagcggggttca
aagggcaagttggaggccatcatcaccccgcctcccgccaagaaatccaagctccccccc
gccaagaaaactgggccgaagagagcagggagcaagaagggagctggaggaaagaagaag
aagcagggagaggtcagcaaagcagctaacgccgacagcaccactgaggggcccccagcg
gacgggttcactgtcctctccaccaagagcctcttcctggggcaaaagctgaacctcatt
cacagtgaaatcactaacttggctgggtttgatgtggaggctgttatcaatcctaccaat
gctgacattgaccttaaagatgatctagggaacgctctggagaagaaagggggcaaggag
tttggggaggcggtcagcgagctgcgcaagaagaatggcccgctggacgtggcaggagcg
gctctgagtccaggcttcgggctccctgctaagtttgtgattcactgcaacagcccgggt
tggggctctgacaagtgcgaagagctgctggagaagacagtgaagaactgcctggcgctg
gcggatgagaagaagctcaagtcaatcgcgttcccttctattggcagcggcaggaatgga
ttcccaaagcagactgcagctcagcttatcctgaaagccatctccagctacttcgtctcc
acgatgtcctcttccatcaagacggttttcttcgtgctgttcgacagcgagagtataggg
atctacgtgcaggagatggcgaagctcgatgccaattaa
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