Polyodon spathula (Mississippi paddlefish): 121325011
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Entry
121325011 CDS
T07273
Name
(RefSeq) glial fibrillary acidic protein-like
KO
K05640
glial fibrillary acidic protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121325011
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121325011
Membrane trafficking [BR:
pspa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121325011
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
121325011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
GAS
Suppressor_APC
BLOC1_2
DUF1664
Laminin_II
Motif
Other DBs
NCBI-GeneID:
121325011
NCBI-ProteinID:
XP_041123229
LinkDB
All DBs
Position
12:complement(38571937..38580737)
Genome browser
AA seq
448 aa
AA seq
DB search
MSLNLETQRVSSYRKMFPGRDLKKQSSGLYSLGSSPRYGSIMFSSSPRVSMGRAKSSALG
LSQDRVDFSLADALNAEYKETRTNEKVEMMDLNDRFASYIEKVRFLEQQNKVLVAELNQI
RGKEPTRLGDIYQQELRELRKQVDQLSTAKARTDIERDNLAQDLGNLRQKLEDEINLRLE
AENNLHSYRQDVDEAALNRVALERKIEALHEEINFLKKIHDEELREMLEQVSSQQVHVDM
DMSKPDLTTALRDIRTQYEAMASSNMQETEEWYRSKFSDMTDAANRNVEALRQAKQEANE
YRRQIQVMTCDLEALRGSNESLERQMREMEEQFAIESANSQESVARLEDDINSLKEEMAR
HLQEYQDLLNVKLALDIEIATYRKLLEGEESRITVPVQSFSNLQLRETSLDTKLSPESHV
KRTVLVKTVEMRDGEIIKESTAERKDLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttaacctagaaacccagagggtgtcgtcctacaggaagatgtttcctggccgg
gacttgaagaaacagtcaagcggactgtactctctgggcagctcccctcgctatgggtca
atcatgttctccagcagcccgcgggtctctatggggcgggcgaagagctctgcgctgggt
ctgagccaggaccgggtggacttctccctggccgacgccctcaacgctgaatacaaggag
acccgcaccaatgagaaggtggagatgatggacctgaacgaccgcttcgccagctacatt
gagaaggtgcgctttctggagcagcagaacaaggtgctggtggcagagctgaaccagatc
aggggcaaggagcccaccaggctgggagacatctaccagcaggagctgcgggagctgagg
aagcaggtggaccagctcagcaccgccaaagccaggactgacatcgagagggacaacctg
gcccaggacctgggcaacctgcggcagaagttagaggacgagattaatctgcgtctggag
gctgagaataacctgcactcatacagacaggatgttgacgaggcagcattgaaccgtgtt
gcgctggagaggaagattgaagccctgcacgaggagatcaacttcctcaagaaaatccac
gatgaggagctgcgagagatgctggagcaggtgtccagccagcaggtccacgtggacatg
gacatgtccaaaccagacctgaccacagcgctgagggacattcgcacccagtacgaagcc
atggccagctccaacatgcaggagactgaggagtggtaccggtccaagttttcagacatg
acggatgcagccaatagaaacgtagaggcactgcggcaggcgaagcaggaagccaatgag
taccggcgccagatccaggtcatgacctgcgacctggaggcacttagaggaagtaacgag
tctctggagaggcaaatgcgtgagatggaggagcagtttgctattgagtctgcgaattct
caggagtctgtggcacggctggaggacgacatcaacagcctgaaggaggagatggcgagg
cacctgcaggaataccaggacctgctgaacgtcaagctggcccttgatatcgagattgcc
acctacaggaagctgctggagggagaagaaagcagaatcactgttcctgttcaaagcttc
tcaaaccttcagctccgagaaacaagcctggacaccaaactgtctcctgagtctcacgtg
aagaggactgttctggttaaaaccgtggagatgagagatggggagataatcaaggagtca
acggcggagcgtaaggacctggcctga
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