Polyodon spathula (Mississippi paddlefish): 121325105
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Entry
121325105 CDS
T07273
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121325105 (cfap43)
Cilium and associated proteins [BR:
pspa03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
121325105 (cfap43)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
CFAP43_N
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_LRRK2
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
121325105
NCBI-ProteinID:
XP_041123324
LinkDB
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Position
13:complement(2781029..2802011)
Genome browser
AA seq
1669 aa
AA seq
DB search
MYIDTMKSIGSLEVRWVQGFTSQRVTFADRTTVCYSCGNHVIFIDLETKKQRVLQSPGGS
IGALAVNVRTRVVAFSEQRLNPSIHVYTFPQFEKQSELKGKAKLEYTTLAFSYSGAYLAS
YSSIPDHTLTIWNWQDGVPLCSEAQPGVEVTRLMFNPMNWHQLCMTSERSLKVWNIERSD
TLHCMKPIMISMPALEPSVPQTEDVSSSYLDSKFSYYGPVMPVSAISGLVGEMAETFVPK
EAMKKQIRPTSFCWTSTTDLYVGCEEGHLMLVSPETGKVTMLHNLCEKHPPGDSHHVLQQ
GNLDSLALHKDGLYAAGTDGILRRIHIKGVNIEVDICCALEEPIRNIEFSPDFESMVLAS
HKGAIYRYSPGEPGEVSRILDVRSGNFVAAAPLSPGNQYCVSVRESGEVQVWSLEDGDCT
SALSLKVQATCLACCPSARYCAVGTASGHVYFIDLTKVEQPRVVHRVHLYNAPLGQLHFD
QGGQYLLTGAPNKHIFILDARPSKMFAVFGYTVAAGFVLGLSAVFNKDNRHVKVLALVTL
EEAANIKEGTRLEMFTLPHQLFTGALGGHTNNRGVFIDDVLQKRMFEVAQPLSSAVLGTN
NRVYGYCNRSKSTQKFMLAEGDMKGVSHVNPEKEVEGHQLGPASLILSPHQQWLASVSKD
GLLRIRDISNLGTYVQVQCHSYRTDGVRSLSFSVDSQAMLTTGFSDGALVCVKWRVDTAG
KMNAAIEYGQSVMSQLETSVMLGNKSLMEMPEWKPAKDTPPSSAVEKEAQEASQKKNVEV
TVEHSYTNLPFVSPVDATWLDEKLDEAIKEESLEFTDTKKSLRKGIKELRRTIQAMMREN
ESLSEIEKLEQQEFNLDVEEQNRLQVEGEQEVARICSEIELENLAKCYLRDVIKKECWDS
MEVKGRSIKAFCSEYEVKNYPMKERTQKETEELVRISRLRKIEMADLQIRKEITEFQTKA
QSDKDEEEIEEEGANELENPALTGSLSSQYDGCNPYLYSQFSLHTKEEKINQIILLQDVI
HSVKLAFNKEFESVFKQKEQEVNRVKDKNQRLQEIMTELDLKEKLWEPELCDNEKPERTL
TVDVSEIKVEKYLTPEQKRKTEELAKIEEQRRLAAQGDNARERALDDMMGGVLEMKKEDI
LKMEIPQPEFMSKPETQWLEDEKKQFKEYEKKVKELNEEREKYRKTLEAEMKKLQTSIKD
STQVFDETLNRLFERKVKSEMVIYQEELKIANLVFSILIEEELVNRETELNHLLDKTRKM
KHASAEELKNCKAQVDAFRETYDNIVAEDKLLDRGFRKEFFDVPTSMVDQLYKLYKRRPR
VQRMRTQIDTVGPADQPGSVQAIREALAPLMKAMDELDDPQNMPEGLDLSIWQRFCLSRR
TKVESEQMVKQKALTLAEMQAFLQKRTEEDEKHKHDTEKIIDDLNGLREEKMRFQLDLIV
QFLLKQGSVEVDGSNFIADYSDALLLHRGAVEDLNGTIRTLGEQKIASMVESKDFRKGII
QQEWEHMRMRMQMEDLNNKARDIQMLKVSRELQAYLNETDHESCSAKQMSVLEQTLVTQK
KNHKKNVKNAKRIIKGLERQITRKDKERDSLDKELQELLVTVSERRHVYDAIAMEDNTAI
NREKRYQDIIERRKLVDLARTQAQEVAILRAEVERLRMKTFPALVQMGH
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgtatattgatacaatgaaaagtatcggttccttggaagtcagatgggtgcagggtttt
accagccagcgtgtgacattcgctgacagaactacggtgtgctactcttgtgggaatcat
gtcattttcatagacctggaaacaaagaagcagcgtgtgcttcagagtccaggagggagc
atcggtgcccttgcagtgaatgtgcgcaccagggtggtggccttctcagagcagagactt
aacccctccatccatgtgtacaccttccctcagtttgaaaagcagagtgagctcaaagga
aaagccaagttggagtatacaacactggcttttagttattctggcgcatatttagccagt
tactcctcaattccggatcacaccctaacgatatggaactggcaagatggggtccctctc
tgcagtgaagcccaaccaggagtagaggtcacgagattgatgtttaaccctatgaactgg
caccaattgtgcatgaccagtgagagatctcttaaagtttggaacattgagagaagtgac
actcttcattgtatgaaacccatcatgatcagtatgccagctttagaaccttctgttcct
cagacagaagatgtttcctccagttacctggacagcaagttttcttactatggacctgtg
atgcctgtctcagctatatcagggctcgtgggagagatggcagaaacatttgtgccaaaa
gaagctatgaaaaagcagattcgccccacctcgttctgttggacctcaaccactgacctt
tatgtgggctgtgaggaaggccacctgatgcttgtgagccctgagacagggaaagtgact
atgcttcataacctgtgtgagaagcatcctcctggagatagccaccatgtcctgcaacag
ggaaacctggacagtctggccctgcacaaggatggactttatgcagcagggactgatggc
attctgcgccgcattcacatcaagggggtgaacatagaggtggatatttgctgcgcattg
gaggaaccaatcagaaacattgaattctcaccagacttcgagtcaatggtcctggctagc
cataagggagctatttacaggtacagcccaggcgagcctggggaggtgtcgagaattctg
gatgtccgtagtgggaacttcgtggcagcagctcctctatctccaggcaatcagtattgt
gtgtcagtcagagaatctggagaagttcaggtttggtcattggaagacggggactgcacc
agcgccttatctcttaaagtgcaggcaacatgtctggcatgctgccccagtgctcgctac
tgtgctgtggggacggcctctggacatgtctacttcattgatctgacgaaggtggaacag
cctcgtgtagttcacagggttcacctttacaatgcaccactgggacagctgcactttgat
caaggaggacagtatctgctcactggagctccaaataaacacatctttattctagatgcc
aggccatccaaaatgtttgcagtctttggatacacagtggcagcaggttttgtgttgggc
ctctccgctgttttcaacaaggacaacagacatgtgaaggttctggctctagttactctg
gaggaagcagcaaacattaaggaagggacccgactggagatgttcacactgccacaccag
ctatttacaggagctctaggaggtcacacaaacaaccgtggagtctttattgatgacgtc
ctgcagaaacgcatgtttgaagtagcacagccgctctcttcagcggtattgggaacaaac
aatagggtgtatggctactgcaacaggtccaagtccacccagaagttcatgctggctgag
ggggacatgaagggagtctcacatgtgaacccagaaaaggaagttgaaggtcatcagctt
ggtccagcgtcccttattttgtctccccatcagcagtggttggcctcggtcagcaaggat
gggctgctccgcattcgagatatttccaatttagggacttatgtccaagtgcagtgccac
tcgtacaggactgatggggttcgatcactgtccttctcagtggacagtcaggccatgttg
accactggcttcagtgatggtgcccttgtctgtgttaaatggagagttgatactgctggc
aaaatgaatgccgccattgaatatggccagagtgtcatgtcacaactggagacttctgtg
atgttgggaaacaagagcctcatggaaatgcctgagtggaaaccagctaaagacacacca
ccttcatctgcagtggagaaagaggcacaggaggccagtcagaagaagaatgtggaggtg
actgtggaacacagttacaccaacctcccttttgtcagccctgtggatgccacttggctc
gacgagaagctagatgaggcaatcaaagaggagagcctggagttcacagatacaaagaaa
agcctgaggaaaggcattaaagagcttcgaaggacaatccaggctatgatgcgtgagaat
gaatccttgtccgagattgagaaacttgaacagcaggagtttaacttggacgtggaagag
cagaataggttgcaagttgagggagaacaggaagttgccaggatctgcagtgagattgag
ctggagaacctggccaagtgctacctgcgtgatgtcatcaaaaaggaatgctgggactct
atggaggtcaaaggtcgttcaattaaggcattctgctcggaatatgaagtgaagaactat
ccaatgaaggagcgaactcagaaggagactgaggagctggtgcgaatcagccgtctgagg
aagatcgaaatggctgatctacagattcggaaggagataactgagttccagacaaaagcg
cagtctgacaaagatgaagaggagatagaggaggagggagcaaatgagttggagaaccca
gctctaacaggcagtctgagctcccagtacgatggctgtaacccttatctgtacagccaa
ttcagcctgcacaccaaagaggagaaaatcaaccagatcattctactacaggatgtcatt
cacagcgttaaattagctttcaacaaggagtttgagtccgttttcaagcagaaggaacag
gaggtcaatcgggtgaaggacaagaaccagaggcttcaggagataatgacagagctggat
ctgaaggagaagctctgggaaccagagctctgtgataatgaaaagccagaacggactctc
actgtggacgtttcagaaatcaaagttgaaaaatatctcactccagaacagaagcggaaa
acagaagagctagccaagattgaggaacaaagaaggctggctgcacagggtgacaacgct
agagagcgagctcttgatgacatgatgggtggagtccttgagatgaaaaaagaggatatt
ctaaaaatggagattccacagccagagttcatgtccaagcctgaaacacaatggttggaa
gatgagaagaagcagtttaaagaatatgaaaagaaagtaaaggaattgaatgaggaacga
gaaaaatacagaaagacattggaagcagaaatgaagaaactgcagacctccatcaaggac
tcgacccaggtcttcgatgaaacactgaacagactgtttgagaggaaggtgaaatctgaa
atggtgatctaccaggaggagctcaaaattgcaaatttggtattctcaattcttatcgag
gaagagttggttaacagggagacagagctcaatcacctccttgataagacaaggaagatg
aagcatgctagtgcagaggaattaaaaaattgcaaagcgcaagttgacgccttcagagag
acctacgataacattgtggcagaagacaaactgcttgaccgagggttcagaaaggagttt
tttgatgtgcccaccagtatggttgaccagctgtacaaactttacaagcgcagacccagg
gtacagaggatgagaacacaaatcgatacagtcggaccagcagaccagccaggctcagta
caagccatcagggaagcactcgccccattaatgaaagccatggatgagctggatgaccca
caaaacatgcctgagggactggatctgtccatctggcaacggttctgtctgtccagaaga
accaaagtggagagtgaacaaatggtgaaacagaaggctctcactttggctgagatgcaa
gcgtttctgcagaaaagaaccgaagaagatgagaagcacaaacatgacactgaaaagatc
atagatgatctcaatggacttcgtgaagagaaaatgcggtttcagttggatctcattgtt
cagttcttgctgaaacaaggaagtgtggaagtggatggcagcaacttcattgcagactat
tccgatgcactcctccttcataggggtgctgtggaggatctcaacggaacaatcaggaca
ttaggggagcagaagatagcgagcatggtggagagtaaagacttccgaaagggaatcatc
cagcaggaatgggaacacatgagaatgagaatgcagatggaggatctgaacaacaaggct
cgggatatccagatgctgaaagtgtccagagaactgcaagcgtatctgaatgagactgac
cacgaaagctgttcagccaagcagatgtctgttctggagcaaacactagtcacccaaaag
aagaaccacaaaaagaacgtaaaaaatgctaaaaggattatcaaggggctggagagacag
atcacccgtaaagacaaggagagagacagcttggataaggagctgcaggaactgctggtg
acagtatctgaaagaagacacgtctacgatgccattgctatggaagataacacagcgatc
aacagggaaaaacgataccaagacatcattgagagacggaagctggtggacttggcaagg
acacaagcccaagaggttgccatcctcagagcagaggttgagaggctgagaatgaagact
ttccctgcattggttcaaatgggacactga
DBGET
integrated database retrieval system
