Polyodon spathula (Mississippi paddlefish): 121325112
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Entry
121325112 CDS
T07273
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase A-like
KO
K09565
peptidyl-prolyl isomerase F (cyclophilin D) [EC:
5.2.1.8
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121325112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121325112
Enzymes [BR:
pspa01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
121325112
Chaperones and folding catalysts [BR:
pspa03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
121325112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
121325112
NCBI-ProteinID:
XP_041123335
LinkDB
All DBs
Position
13:complement(10835427..10840222)
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AA seq
200 aa
AA seq
DB search
MLQFAGRQLFQCSFKDLSKLGSLALITARLCSSQPSKNPVVYFDIAADNQHLGRVTFELN
ADVVPKTAENFRALCTGEKGYGYKGSIFHRVIPQFMCQGGDFTNHNGTGGKSIYGARFPD
ENFKLQHTGPGMLTCSNAGPNTNGSQFFICTTKTPWLDGKHVVFGHVKEGIDVITQVEKY
GSRNGSTSKKITVTDCGELV
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagttcgcaggtcgtcagttatttcaatgcagttttaaagatctttctaaattg
ggttctttggcgttgattacagctagattatgcagctcacaaccaagtaagaatccggtg
gtgtattttgacattgctgcagataaccagcatcttgggagagtcacctttgagttgaat
gcagatgtggtccctaaaacagcagagaacttcagagcactttgcacaggggaaaaggga
tatggatacaaggggtcaatatttcacagggtgattccccagttcatgtgccagggtgga
gactttaccaaccacaatggcacaggagggaaatcaatctatggtgcaaggtttccagat
gagaacttcaaactgcagcacaccgggccaggtatgttgacctgttccaatgctggacca
aacacaaatggatctcagttctttatatgtaccaccaaaactccatggctggacggaaaa
catgttgtgtttggccatgtaaaggaagggatagatgtgataacacaagttgaaaagtat
ggctctagaaatgggagcacctccaagaagataactgtcacagactgcggagagcttgtg
taa
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