Polyodon spathula (Mississippi paddlefish): 121325145
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Entry
121325145 CDS
T07273
Name
(RefSeq) THAP domain-containing protein 11-like
KO
K23211
THAP domain-containing protein 11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
121325145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121325145
03036 Chromosome and associated proteins [BR:
pspa03036
]
121325145
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2CysHis zinc factors
121325145
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Gene silencing
Transposable elements
121325145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THAP
Transposase_31
RA_3
Motif
Other DBs
NCBI-GeneID:
121325145
NCBI-ProteinID:
XP_041123390
LinkDB
All DBs
Position
13:complement(41513875..41516219)
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AA seq
296 aa
AA seq
DB search
MPGFTCCVPGCYSNSHRDRELRFYTFPKDPVQRDIWLKNISRTGVSGCFSTFQPTTGHRV
CSIHFPGGRKTYSIRVPTLFPLRGINEKRGRRGRNRKVSAPAAAGVVSTPASAATVAATV
DVTASYASTCSLLIAVKHEDTGIGASYQGLNDPSAETERKRGPDEAKPIDLTVQQEADGY
CEPVTASTSEGEGFPAAPGGEFTYPTTSTLTVAPIVVYNGKETFDHSYSLTSGTTSTELL
KKLNEQRDIIALMEVKMKEMKSTIRQLRITEAKLKEEVRDRDRILSMAVLRKKHGV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcttcacgtgttgcgtccccggctgctacagcaactcccaccgggaccgcgaa
ctgcgcttctacacctttccaaaggaccccgtgcagagagatatctggctgaagaacatc
tcccggaccggggtgagcggctgcttcagcaccttccagcccaccaccggccaccgggtc
tgcagcatccacttccccgggggcaggaagacctacagcattcgggtgccgaccctgttc
ccgctacgcggcataaacgagaaaaggggcaggcgagggaggaacagaaaagtgtctgct
cctgctgccgctggtgttgtttccactcctgcctctgcagctactgttgctgccacggta
gacgtgacagcatcgtacgcgtccacttgcagcctcctcatcgcagtgaaacacgaagat
accggcattggtgccagctaccaggggctgaatgacccaagcgctgagaccgagcgcaag
aggggaccggacgaggcaaagcccattgacctgacggtgcaacaagaagccgacgggtac
tgcgagccagtgacggcgtccacctcggagggggaaggctttccggcggccccaggtgga
gaatttacttaccctacaacgtccaccctaaccgtcgctccgattgtggtgtacaacggc
aaggagacatttgatcactcgtactcgctgacgtccggaaccacctccacggagctgctg
aagaaactgaacgagcagcgggatatcatcgccctgatggaggtcaagatgaaggagatg
aagtctaccatccgacagctcaggataacagaggcgaagctgaaggaagaggtgagggac
agagacaggatcctgtccatggctgtattaaggaagaagcacggcgtgtaa
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