Polyodon spathula (Mississippi paddlefish): 121325173
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Entry
121325173 CDS
T07273
Name
(RefSeq) inactive heparanase-2-like isoform X1
KO
K07965
heparanase 2 [EC:3.2.1.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00531
Glycosaminoglycan degradation
pspa01100
Metabolic pathways
Module
pspa_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
121325173
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121325173
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Enzymes
121325173
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
121325173
NCBI-ProteinID:
XP_041123425
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Position
13:complement(8494365..8557853)
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AA seq
586 aa
AA seq
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MMTMPQHRLSSILASSLWVASVAMMVQPAESSAGNYRRPVPGGKSQGFTERTLILLDVNT
RSPIKTLNANFLSLQLDPSIIHDGWLDFLSSKRLVTLARGLAPAYLRFGGKRTDFLYFHN
LKNLAKHRGGPGPDYYLKNYEDDIVRSDIALDKQKGCKLASHPDIMLELQREKAAQMQLV
LLKEQFSNIYSNITITARSLDKLYNFADCAGLHLIFGLNALHRNPDNSWNGSSSLSLLKY
SASKKYNISWELGNEPNSYRAMVGRTVNGSQLARDYLQLRKLLQSVRFYNNRASLYGPNI
GKPRKPAILLLDRFMKTAGSAVDAVTWQHYDIDGRVAKVADFMKTRLLDTLTEQISKVLK
AVKTHAPGKKVWLGGVGPAWTGGTNNLSDTYAAGFLWLNTLGLSAMQGIDVVIRHSFFDY
GYNHLVDQNFNPLPDYWLSLLFKHLVGPRVLAVHVAGLQRKPRPGRVIRDKLRIYAHCTS
FQNHNYVRGSITLYIINLHRSRKKIKLVGTLRGKAVHQYLLQPYGIEGLQAKSVQLNGEP
LKMLDDETFPQLKPKILRSGRTIVMPPMTIGFYVVKNVNAYACRYR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgatgccccagcatcgcctctcttccatccttgcctcttcgctctgggtggca
tccgttgctatgatggtgcagcccgcggaatcttcagcaggtaactacaggagacctgtc
ccgggggggaagtcccaagggttcacggaaaggacgcttattctccttgacgtgaacact
aggagtcccattaagactctgaatgcaaacttcctttccttgcaattggacccttctatc
attcatgacggctggctcgacttcttaagttccaagcgattggtgacgctggcaaggggt
cttgccccagcctatctgaggtttggggggaaaaggacagactttctttacttccacaac
ctaaagaatctggccaagcatagaggaggcccgggtccagactactacctgaagaactat
gaagatgatattgtgcgaagtgacattgccctggacaagcagaagggctgcaagctggcc
agtcatccagacatcatgttggagctgcagagagagaaggctgcacagatgcagctggtc
ctgctcaaagagcaattctccaacatctacagcaacatcacaataacagccaggtctcta
gacaaactctacaactttgccgactgtgccgggctgcacctcattttcgggctcaatgcc
ctgcaccgaaaccctgataactcctggaatggatccagctccctgagcctcctcaagtac
agcgctagcaagaagtacaacatctcctgggagctgggcaacgagcccaacagctaccgg
gcgatggtggggcgcactgtaaacggcagccagctggctcgggattacctccagctgcgg
aaacttctgcagtcagtgcgcttctacaacaaccgcgccagcctctacggacccaacatt
ggcaagccccggaagcccgccatactgctgttggacaggttcatgaagactgcaggctct
gctgtagatgcagttacatggcaacattatgacattgacgggcgggttgccaaggttgct
gatttcatgaagactcgtctgctggacactcttacagagcagatctccaaagtgctgaag
gctgtgaagactcatgccccgggtaagaaggtgtggcttggtggagtcgggccagcctgg
accgggggcaccaacaacctatcagacacttacgcagccggcttcctgtggctaaataca
ctgggattgtctgcaatgcaaggaattgacgttgtcatacggcactcttttttcgattat
gggtacaatcacttggtggaccagaatttcaaccctttacctgattactggctgtcgctg
ctcttcaagcacttggtgggtccccgggtccttgccgtgcacgtcgctggtctgcagagg
aaaccccgtcctggcagagtcatccgggacaaactgcgcatctacgcacattgtaccagc
ttccaaaatcacaattatgtgcgaggatccataactctctatattatcaacctacaccga
tcaagaaagaaaattaaactggtcggaactctccgaggcaaagcagtgcatcagtacctg
ctacagccctatggcatagaaggattgcaggcaaagtctgtccagctaaacggagagcct
ctcaagatgttggacgatgaaactttcccacagttaaagcccaagatactgcgctctgga
cgcacaatcgtcatgccgccaatgacaatcggtttctacgtggtcaagaacgtcaacgca
tacgcctgccgctatagatag
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