Polyodon spathula (Mississippi paddlefish): 121325180
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Entry
121325180 CDS
T07273
Name
(RefSeq) LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121325180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121325180
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121325180
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
LIM
LIM_FHL2-3_N
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
121325180
NCBI-ProteinID:
XP_041123436
LinkDB
All DBs
Position
13:complement(7692257..7701526)
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AA seq
336 aa
AA seq
DB search
MQSSSSYSVQSKTTTTSSFPQPSAVQQRAVPTPASPPKVVSTINIVPTAYPPAPAPAPVY
TPAPAPVPAAAPAPTTAGRPPWVTDNSFAQKFVPGASTTTLTKHIQPLPQAAPLPPAIIP
NSSLPHHPAPSTAPFSTPSVGRGILQRAERFPAGSRTPLCSSCNGIIRGPFMVALGRSWH
PEEFNCHYCHTSLADASFVEEQNNVYCEGCYGQFFAPTCARCSTKIMGEVMHALRQTWHT
TCFVCAACNKPFGNSLFHMEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKFIEALGQTWH
DSCFVCAVCNVNLEGKPFYSKKDKPLCKKHAHAINV
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctcctcctcctacagcgtccagtccaaaaccaccacgaccagctcctttccc
cagccctcggcggtacagcagagagcagtgccaacccctgcctctcctccaaaggtcgtc
agcaccatcaatattgtgcccactgcctacccccccgccccagccccagctccagtatat
acccctgccccagctccagtcccagccgctgcccctgccccgacgactgctggtcgcccc
ccctgggtgacggacaactccttcgctcagaagtttgttcctggggcaagcaccactacc
ctcaccaaacacatccagcctctcccccaggctgccccgcttcctcctgccatcattccc
aactcctccctcccccatcacccagcccccagcaccgcccccttctccaccccctccgta
ggccgcgggatcttgcagagggcagagcgcttcccggcaggcagtcggaccccgctgtgt
agctcctgcaatggcatcatcaggggtcccttcatggtggcgctggggcgctcctggcac
ccggaggagtttaactgccactactgccacacctccctggcggacgcatcctttgtggag
gagcagaacaacgtgtactgcgagggctgctacgggcagttcttcgcgcccacctgcgcc
cgctgcagcaccaagatcatgggggaagtgatgcatgcactgaggcagacctggcacacc
acctgcttcgtgtgcgctgcctgcaacaagcccttcggaaacagcctcttccacatggag
gacggagagccctactgtgaaaaagactatgtcgctctgttcagcactaagtgccacggc
tgtgacttcccagtggaggcaggagacaagttcatcgaggccctgggacagacctggcac
gactcctgcttcgtctgtgcggtgtgcaacgtgaatctggaaggaaagccattctactcc
aagaaggacaaaccactgtgtaaaaagcacgctcacgccatcaacgtgtag
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