Polyodon spathula (Mississippi paddlefish): 121325187
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Entry
121325187 CDS
T07273
Name
(RefSeq) uncharacterized protein LOC121325187 isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121325187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121325187
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121325187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
121325187
NCBI-ProteinID:
XP_041123449
LinkDB
All DBs
Position
13:7512908..7544436
Genome browser
AA seq
1492 aa
AA seq
DB search
MSQMGKILHLYVEVRSVPEEGGGPVGEVSRGTDRGGVDRTESQPTPPKQRRPAPSPSVQS
ETALQHSTQNTPSNSNKPQARLTASPQQRCQQPSSPREQAALQRQSLLSDGPGRGGVGGA
EMANHRTAPLQRTRSECEPFRGGCSSPIPTGRTTAPATPSNGRRGGTGEGGGDGRRSVVT
YGYIEKANVKTVSSPYLSSRRPDKQLQEETVWVENQGLSPGPSPKLVHPGSASSHPATSP
GLRHKTLNSIAKAATSRALEEFGSPQLRRRAATQVGYQQTHKNQQNQQPRCQSWTGSPVL
TGRNNPRMPRSSCTLPRSPASNQLSSQGQEADSQDHPSQSMTLPPEVQHCWTGRQSPRLA
SKLSPALERGPGKPASILHHSPQLQASSESPRLCHRVNFKLGDSGPTEGGGGQISPANSP
EVARKLAQEASKLSTIFQARSSQSPTPPLDSPRVDAHKLGRPVSPAAAPQYSQYSQQKID
LQKTEPEHTKDSAVGSPCLRQQRSDIQGTVSTVRPAKSPPVRARQQQQDSPKPQRHPVGH
QWGDTGGADSPNIQSEYVEDSGSPDAEMRQREDAPRPKAGQHIGQCPSRSSSVMHAKQGD
SPSLRTGLDGQGESPRLEYRPGQCEGQASPGCGGRDSVVSSGQQTGQTGALSISQESNTS
HKKTGREDSNSQSVSLSCSLAPSMHSQRVARAKWEFLFGTVSEDSTATGVKDPQDSTTPP
SIDSFSDSRPTLTPPRSLVLRVRGEALANHSVQHVEVELVTPPPAVGGACPRTGIIRRTL
QYSETDLDAVPLRCYRETNIDELLAEQDEADSAFGSNRSVIGTSEEEDGGWGDRKHRRAA
PEEEEVFTLGLERLSSQSSLGATLKSPIDIPAPSHASEEGLDTFSRHFESIMESHRAKGT
SYSSLDSEDLLSSSQTVFTFDLPTLTPEIQGLICQSARLIELSFAPLAPGENPGMSTTDS
AHTRTDSAHTTAPESSGEEGTAGNCSSERPPTLESDPESDLIERLCLGSTDTLTNGSRVD
RNSAKRLAKRLYSLDGFKKSDVARHLSKNNEFSKMVAEEYLHFFNFTGMSLEQALRAFLR
EFALMGETQERERVLAHFSRRYLACNPSVIPSEDGVHTLTCALMLLNTDLHGHNIGKRMT
CPQFIANLEGLNDGADFPKDLLKALYSAIKTEKLQWTIDEEELRKSFSELADSNSDSASR
TMKRINSCGNPLLSGSQPASTLTYKQGFLVRKVHADPDGKRTPRGKRGWKSFYAVLKGLI
LYLQKGEYRPDKQLSDEDLKNAISIHHSLAMKAADYSKRPHVFYLRTADWRVFLFQAQDA
DQMQSWITRINTVAAIFSSSPFPAAIGSQKKFSRPLLPASSTKLSQEEQVQSHEARFRAT
SAELAELCSYPPERKVKGRELEEYRQRNEYLEFEKTRYGTYAMLLRAKLRCGEEDLARFE
SRLFEGPEAEDNGLQRAHSSPTLPHDPSQGGAAGQGKRSEGQRHSYRQAVKQ
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagatgggtaagatcctgcacctctacgtggaagtgagatcggtcccagaggaa
gggggggggccagtaggggaggtgtcgaggggtacagacagagggggggtcgacaggaca
gaatcccagccaacaccccccaaacagagacggccagcccccagcccctctgtccaatca
gaaacagcactccagcacagcacccagaacactcccagcaactccaacaagccccaggct
cgactgactgcatccccccagcaacgctgccagcagccatctagccccagagagcaggct
gccttgcagagacagagcctgctttctgatgggcccgggcgagggggggtcgggggggcg
gagatggccaatcacaggacagctcccctgcagcgcacgagatccgagtgtgagccgttc
agagggggctgcagctcgcccatcccaacaggcaggaccactgctccagcaacgccgagc
aatgggagaaggggagggacgggggaagggggaggtgatggaaggaggtcagtggtcacc
tatggctacatcgagaaggctaatgtgaagaccgtgtccagcccctatctgtcgagccga
cgccctgataagcagctacaagaggagaccgtgtgggtggaaaaccaggggctctctcct
ggccccagccccaaactggtgcaccctggatcagccagcagccatcctgccacctccccc
gggctgcgccacaaaaccctgaactccattgctaaggcagccaccagccgcgccctggag
gaatttgggtcaccgcagctgagaaggagagcagcgacccaggtgggttaccaacaaacc
cacaaaaaccagcaaaaccagcagccgcggtgtcagtcctggactgggagcccagtgttg
acgggacgcaataacccgcgaatgcccaggtcatcttgcaccttgcctaggagcccagcc
agcaatcagctctcttcccagggccaggaagcagacagccaggaccacccatcccaaagc
atgaccctgccacccgaggtgcagcactgttggacgggcagacagagtcccagactggcc
tccaaactaagcccagccctggagagagggccagggaagccagccagcatcctgcaccac
agcccccagctccaggccagcagtgagagccccaggctctgccacagagtcaacttcaag
ctgggggattcagggcccactgagggaggagggggacagatttctccagccaacagcccc
gaagtggctcgcaagctggctcaggaggctagcaagctgtccaccatttttcaggccagg
agctcccaatcccccactcctcccctcgatagccccagggtggacgctcacaaactgggg
cgccctgtttctcctgctgctgctccccagtactcccaatactcccaacaaaagatagat
cttcagaagacagagccggaacacactaaggattcagcagtggggtcaccctgcttaaga
cagcaaaggagcgacatccaggggactgtgtccacggtcaggcctgcaaagtcccccccc
gtgagagccagacagcagcagcaggacagtccgaaaccacagagacacccagttggacat
cagtggggagacacagggggggcagacagtccaaatatccagagcgagtatgtagaggac
agtggctcgcccgacgctgaaatgagacaaagagaggatgcccccaggccaaaagctgga
caacatattggacagtgtccaagcagatcatcctctgtgatgcatgcgaaacagggggac
tcccccagcctgaggacaggactggacggacagggggaaagtccgaggcttgaatatcgt
cctggacagtgtgaaggtcaggcatctccgggatgtggtggaagagacagtgtggtcagc
tcaggccagcagactggacagacaggggccctcagtatttcacaagagtccaacaccagc
cacaagaagacagggagagaggactccaactctcagtcagtcagtctgtcgtgctcgctt
gctccctccatgcactctcagagagttgcccgtgcaaagtgggagttcctgttcgggacc
gtgtccgaggacagcacagccacgggggtcaaagacccccaggactccaccacaccccct
agcatcgactccttcagcgattctcgccccactctgacgcccccccgctcactggtcctg
cgggtcagaggtgaggctctggccaatcacagcgtgcagcatgtggaggtggagctggtg
acccctccaccggcggtgggaggggcctgcccgcgcacagggataatccgacgcacgctg
cagtattcggagaccgacctggacgccgtaccgctgcgctgctaccgcgagaccaacatc
gacgagctgctggcggagcaggacgaggcagactccgcctttggcagcaaccgcagcgtc
atcggaaccagtgaggaggaagacgggggctggggggacaggaaacaccggcgtgccgcc
cctgaggaggaggaagtgtttaccctgggcttggaacgcctctcttctcagtcgtcactg
ggcgccactctcaagtccccgattgatattccggctcccagccacgcctcggaggagggt
ctggacacattcagccgacacttcgagagcatcatggagtcccaccgtgccaagggcaca
tcctacagcagcctggacagcgaggacctcctatcctcgagccagaccgtcttcaccttc
gacctacccacgctgacccctgagatccagggcctgatctgccagagcgcgcgtctcatc
gagctcagcttcgcccccctggcccctggagagaaccctggcatgtccaccacggactcc
gcccacacccgcacagactccgcccacaccaccgcccctgagagcagtggggaggagggc
accgctgggaattgttccagtgagcgcccccccaccctggagtcggacccagagtcggac
ctgattgagcggctgtgcctgggcagcaccgacacgctgaccaatgggagcagggtggac
aggaactctgccaagcgactggctaagagactctacagcctggacgggttcaagaaatcc
gacgtggccagacacctgagcaagaataatgagttcagtaagatggtggcggaggagtat
cttcacttcttcaacttcacaggaatgagtctggagcaggcattgcgagccttcttgagg
gagtttgctctgatgggcgagactcaagagagggagagggtgctggctcacttctcacgc
agatacctggcctgcaatcctagcgtcatcccctccgaagacggagtgcacacactgacc
tgcgcgttgatgctgctcaatacagacctgcatgggcacaacattgggaagaggatgacc
tgtcctcagttcatcgccaatttagaagggctcaacgatggagcagactttcccaaagat
ctcctcaaggccctatacagcgccatcaagactgagaagctacagtggacaattgacgag
gaggaactgcgcaagtcgttctcagagctggctgacagtaacagtgactccgcctcccgc
accatgaagcgaatcaacagctgcggaaaccccttgctgagtgggtcccagcccgcgagc
acgctgacctacaagcagggcttcctggtgcgcaaagtgcacgccgaccccgacggcaag
aggaccccacgagggaagagaggctggaagagcttctacgctgttctgaagggactcatc
ctctacctgcagaagggggagtacaggcctgacaaacagctctcagatgaggatctgaag
aacgctatctccatccaccactccctcgccatgaaagctgccgactacagcaagagaccc
cacgtgttctacctgcgcaccgcggactggagggtcttcctgttccaggcacaagatgct
gatcagatgcagtcatggatcacgcgaatcaacactgtggcagccatcttctcatcttcg
cctttcccggcggccatcggctcccagaagaaattcagccggcccttgctccctgccagc
agcaccaaactatcacaggaggagcaggtccagtcccacgaggctcggttccgcgccacc
tcggcagagctggcagagctgtgctcctacccccccgaacgcaaggtgaaggggagagag
ctggaggagtacaggcagaggaacgagtacctggagtttgagaaaactcgttatggaacg
tatgcgatgctgctgcgggcaaagctgcgctgtggagaggaggatctggcacgtttcgag
tcacgcttgttcgagggacctgaggctgaagacaatgggctgcagagagctcactccagc
ccgacccttccccatgaccccagccagggaggggccgcgggccagggcaagcgcagcgag
ggccagcgacacagctataggcaggcagtgaagcagtga
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