Polyodon spathula (Mississippi paddlefish): 121325192
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Entry
121325192 CDS
T07273
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121325192
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Others
Others
121325192
Endosome - Lysosome transport
121325192
Endosome - Golgi transport
121325192
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
121325192
NCBI-ProteinID:
XP_041123458
LinkDB
All DBs
Position
13:complement(2391046..2524505)
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AA seq
1248 aa
AA seq
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MERGAGFCPGLHSALWTCFLLSACFLIVAKGEITCTSCPSPAKPHRRGVLLDLQMDAGKS
GTRFLTKHLERSVEPYYSGLGVSVASDVTGVPGNVKSVDTGVVIPQSLASSKVTGPGIEE
AGGKKNVVRGREMTMDAEKPVDLGQNGGEAVSDRGTFIHTDGKNVIYGDNLLRAKRSRSS
TLDGQRLSRAELKWTRDDGKVTNSKQEELKLTSTTFALTGDSAHNQAMVHWSGHNSSVIL
ILTKLYDFNLGSVTESSLWRSTDYGATYEKLNDKVGLKTVLSYLYVCPSNKRKIMLLSDP
EIESSLLISSDEGASYQKFRLNFYILSLLFHPRHEDWILSYSHDQKLYSSIDFGRKWQLV
HENVNPNRFYWSVIGLDKESDLIHMEARTADGHARYITCRIQACSELDRSHPFPGYIDSS
SLVVQDEYMFIQVTTGGRATYYVSYRRETFIQIKLPKYALPKDMHIISTDENQVFAAVQE
WYQNDTYNLYISDTRGIYFTLALEHVKTSRGLEGNIMIELYEVAGIKGMFIANKKLEGQV
KTYITYNKGRDWRLLKAPVTDLRGNPIHCVLPFCSLHLHLQVSENPYTSGSISSKVSAPG
IIVASGNVGTELTFNDVGMFISTDAGNSWRQIFDEEHSIWFLDKGGALIAIKQTSLPIRH
LAISFDEGKQWSKYSFTLAPLFVDGVLVEPGIESQIMTFFGHFSHRSEWQLVKIDYKSIF
SRRCTEGDYQTWHLNNQGEPCVMGEKQSYMKRRPGNHCMLGKDYSRILSSEPCICAASDF
ECDYGYERRGDGKCLPAFWFNPSTVSRSCSLGQSYLSSTGYRKVVSNNCTAGVKEIYTAR
KQQCPRRAPRGLHVVTSDGKLISSQGSNVTFLVFLEDGDSLRTNIQLDFGDGIAVSYSNL
SLIEGGIKHVYKTSGIFRVGALAENSLGSDSAALYLHITCPVERIHLSVPIVVIKNKEVN
LTAMVWPSHSRTITYFWWFENSTEPVITLEGSVSYTFMVEGMNTVTVQVSAGDAILQDSK
TIAVHEFFKSLLLSFSPNLDEYNPDIPEWRDDVSKVIKKALVQVSDFPEEQLLVAVLPGI
PTVAELFLLPLNNLTEERKKNEADLEQISRILVSALNQNVVEFELKPGVRVIVYITQLTL
APLVDSSPRLSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIFAEVNHEKEQEMIGSVS
ETTPTIILSEFTSREQQLEKELETRVIGGTATDGESESTREIPNCTSV
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggggctggcttctgcccaggcttacactcggctctatggacctgctttctg
ctctctgcttgttttctgattgttgccaagggtgagataacttgcacatcgtgcccatcg
ccggcgaaaccgcaccggaggggtgtgttattggacctgcagatggacgcggggaagtcc
gggacaagatttctaacgaagcatttggaaaggtctgtggagccttattattcggggcta
ggagtttcggttgcttcggatgtaacgggtgttcccggtaatgtaaagtcagtggacact
ggcgtggtaataccccagtccctagctagttccaaagtgacaggtcctggtatagaagag
gccgggggcaagaaaaatgtggtcagggggagagagatgaccatggatgcggagaaaccg
gttgatttagggcagaatggtggggaagcagtttcagataggggcacatttatacacaca
gatggcaagaatgtgatatacggtgacaacttgctgagggcaaagcggagccgatccagc
acattggacggacaaagactaagcagagcagagttgaaatggaccagagatgacgggaaa
gtgaccaactccaagcaggaggagttgaaacttaccagcaccacctttgcattgaccggg
gattctgctcataaccaagccatggtgcactggtcaggacacaacagcagtgtgattctc
atcctgacgaagctctatgactttaacctgggaagtgtcactgagagctctttgtggaga
tcaactgactatggagctacttatgaaaagctgaacgacaaagtgggcctgaagactgtc
ttgagctatctgtacgtctgcccaagcaataaaaggaagataatgcttctgagtgatcca
gagattgaaagcagtctactcatcagttcagatgaaggggccagctatcagaaattccgt
ctcaacttttacattctgagcctgctgtttcatccaagacatgaagactggattctgtct
tacagccacgaccaaaagttatacagttctatagattttggaaggaaatggcagctggta
catgagaatgtcaaccccaacagattctactggtcagtaatcggcttagacaaggagtca
gatctcatacacatggaggcacggactgcggatgggcatgctcgatacattacctgcagg
attcaagcctgttctgagctggacagaagccaccctttccctggatacattgacagcagt
tccctcgtggttcaggatgagtatatgttcattcaggttacaacaggtgggagggccact
tactatgtgtcctatcgaagagagactttcattcaaatcaaattaccaaaatacgcactg
ccaaaggacatgcacattatcagtacggatgagaaccaggtgtttgcggctgtgcaggag
tggtaccagaatgacacctataacctgtacatatcagatacccgagggatctacttcact
cttgcactggagcatgtaaagaccagcagaggactggaggggaacatcatgattgagctc
tatgaggtagcagggataaaaggaatgttcattgcgaacaaaaagcttgaaggccaagtg
aagacttacatcacatacaataaagggagggactggcgtttgctgaaggcacctgtcaca
gacctgagaggaaaccccatacattgtgttctgccattttgttccctgcacctacacttg
caagtttcagagaatccatatacttctggaagcatctcaagcaaggtgtctgctcctggg
attatagtggcttcaggtaatgtaggcactgaacttaccttcaacgatgttggaatgttc
atatccactgatgcggggaacagctggagacagatttttgatgaagagcacagtatctgg
ttcctggataagggtggagctctgattgctattaaacagacatcactgcctatcagacat
ctggcaataagctttgatgaggggaaacagtggagcaaatacagctttaccttggcccca
ctgtttgtagatggagtgctggtggagcctggaatagagagtcagataatgacgtttttt
ggacacttcagtcatcgctctgagtggcagctcgttaagattgactacaagtccatcttc
agtaggaggtgcacggagggagactatcagacctggcatctaaacaaccagggtgaacct
tgtgtaatgggagaaaagcagagctacatgaagcgcaggccaggaaaccactgcatgctg
ggaaaggactattccagaatattgtcctcagagccatgtatctgtgctgcctctgatttt
gaatgtgattatgggtatgagcgtcgtggagatgggaagtgtttgcctgccttctggttc
aacccctctactgtatcccgaagttgcagccttggacagagttatctcagcagcactggg
taccggaaggtggtgtccaataactgcactgcaggagtgaaggagatctacacagccagg
aagcagcagtgccctcgtcgtgctccccggggcctgcatgttgtcactagcgatggcaag
ctgatttcttcacaggggagcaatgttaccttccttgtctttttggaagacggcgactct
cttaggacaaatattcagttagattttggagatggcattgcagtttcctactccaatctc
agcctcatagagggtgggatcaaacacgtttacaagacctctggcatattccgagtgggc
gctctggcagaaaacagcctggggtcagacagcgccgccctttacctgcacataacatgt
ccagtggaacgcattcatctttctgtcccaatcgttgtcataaagaacaaagaagtcaac
ctcactgctatggtgtggcccagtcattccagaacaattacttatttctggtggtttgaa
aacagcactgagccagtgatcacgctggaaggaagtgtatcctataccttcatggtggag
gggatgaacactgtcacagtgcaagtctctgctggcgatgcaatactgcaggactcaaag
acaatcgcagttcatgaattcttcaagtctctgctgttgtccttttctcccaatcttgat
gagtataaccctgatatcccagaatggagagacgatgtcagtaaagtcattaagaaggct
cttgtacaagtgtctgattttccagaagagcagcttttagttgctgtgcttccaggcatc
cccactgttgctgagctttttcttttaccacttaacaacctgacagaggagaggaaaaag
aacgaggctgacttagagcaaatttcaagaattctggtcagtgccctgaatcaaaatgtg
gtggagtttgagctgaagcctggagttagagtgattgtttatattacacaactcacctta
gctccccttgtcgactccagtccaagactcagcagttctgccatgttgatgttgctgtca
gttgtatttctgggtttagcagtttttttaatctacaagtttaaaagaaaaatcccctgg
ataaatatatttgcggaggtcaaccatgaaaaagaacaagagatgattggctctgtcagc
gagaccacgcccacaattatactaagtgagttcactagtcgcgagcaacagctggaaaag
gaactagagaccagggtcataggaggaactgcaacagatggagagagcgaaagcacaagg
gaaattccaaactgcaccagcgtttaa
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