Polyodon spathula (Mississippi paddlefish): 121325206
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Entry
121325206 CDS
T07273
Symbol
dna2
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121325206 (dna2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspa03032
]
121325206 (dna2)
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121325206 (dna2)
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
121325206 (dna2)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
121325206 (dna2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
Dna2_Rift
AAA_11
AAA_30
AAA_19
PDDEXK_1
nSTAND3
UvrD-helicase
DEAD
SRP54
AAA_25
AAA_22
ResIII
Cas_Cas4
bpMoxR
MobB
Anti-RecBCD_p2
AAA_7
UvrD_C_2
T2SSE
CbiA
cobW
YqeC
AAA_18
AAA
PhoH
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
121325206
NCBI-ProteinID:
XP_041123508
LinkDB
All DBs
Position
13:17204185..17225097
Genome browser
AA seq
1422 aa
AA seq
DB search
MLKQNKLKKKSDLGKNYPSISSFFGKKPGAFLKGDGVENVTPVSFGTNMDVKSMVYSLLG
SSDEEKIITALPQSPVLTDDLFLVPETPDSQIKPSNFEKQGDVSPLSRNQHCRDFKLKKN
VSGRGALFTNSTAQSHLRLSKVLNLDSVNKLKPQKRTVCSPEEVQKTKRQKITHVKKPFG
TSHPANESSDNFLGECLKIISCSPPEVKSPANRSALAKANNKTGRLNLQSTEFLRAEKTD
GSPSKTHVGKENAPLKQISSHLFSKNLIKNTNSSRNNTCPGSCSASNEEETVFTQIAEQK
DCIRLNFCDKRSESKTQAHLPASSCTTTLKSVDKRDAVAGRFLAVPDWEAGKAAGVPLDV
LDEKPCPKGSVDSESAAPAEDDPGYVEACWFDDVMEQRDPEPEEKSSDLKKKKAIPDYAV
LSRGLHNRYWVVSVKEVPGLKGYPEKHLSITASQCAEHTELCILQDDWESAPVKQGDIIH
LEGECNSDTWVLHRDAGYLVLTPDLLISGTSIANSIRCMRRAVLSERFKAFDKGMKQMLV
GTIVHEIFQKAAVSYGFADDRLQELTSKTLLGPKYLGEMYSLKLTQVDVRQEIEEYLPSL
SSWARHYFHTSPEAGKRQLQLQLPSDGKLSQQDAASTVTVTEFLDIEENIWSPRFGLKGK
VDLTAGVKIHRRSRNRQLVMPLELKTGKESNSIEHRSQVILYTLMSQERRTDPEAGFLVY
LKTGNMYPVPGTHMDRRELLKLRNTMAYYLTNTVEHDEKQAPRPAPLPPVINDRQACKFC
SQIRNCALYSSAVERERGQLPPEDMQSFLNQESQHLKETHFQYFSHWYLLCALESQTMER
KGGRKNIWLRSAEEREKNGGCVAGVVRTGHVQAVSDTQYLHNFQSRSGVISESSLAVGDR
IVVSDQQKKLIALSAGYITDVSRAMISCTLDRNLSKHPLDTVFRLDQDEGIGGMDTHLGN
LSKLMENSSSSGKLRELIVEFRPPQFIQHLSSVLPREAKDTVANILKGLNKPQKQAMKRV
LLSKDYTLIVGMPGTGKTTTICTLVRILHACGFSVLVTSYTHSAVDNILLKLCKFQIGFL
RLGRLQKVHPDIRSFTDEEMCRRRCVQTLPQLEELYNSELVVATTCMGVKHPIFSRRRFD
FCIVDEASQISQPICLGPLFFADRFVLVGDHQQLPPIVQNTEARALGMDESLFKRLERNS
DAVVQLNVQYRMNSKIMSLSNKLVYEGRLECGSERTASGVVQLPRRSSLELELTAGCAES
SWLRETLEPNHPVCFLNTVEVPAPETAEQGGISNVTEAALVRCIVTMLLKAGCKASSIGV
IAPYRQQVRTISAWLAGPGFSAVEVNTVDKYQGRDKSVIIVSFVRSSDGNLGELLKDWRR
LNVAITRAKHKLIMLGCVPVLLRYTPLERLLRHMENEHMISF
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacaaaacaagctgaaaaaaaagtcggacctgggcaaaaactacccaagcatt
tcctcgtttttcggaaagaaacctggggcctttttgaaaggggatggagttgaaaatgtg
acccctgttagctttggaaccaacatggatgtaaaaagcatggtttatagtcttctaggt
agcagcgatgaagaaaaaattattacagctctcccccagtcgccggttttaacagacgat
ctgtttttagttcctgaaacaccagacagccaaatcaaaccctcgaattttgaaaagcaa
ggggatgtatccccactatcacgaaaccagcattgcagggacttcaaattgaagaagaat
gtctctggtagaggagctctgtttacaaacagtacagctcagagtcacttgcgcttgtcc
aaagtgctgaatctggacagcgtcaataaattaaagcctcagaaaaggactgtctgcagc
cctgaagaagtacagaaaaccaaacggcaaaaaataacccatgttaagaaacctttcggt
accagtcacccagcaaatgaatcctccgataactttctgggtgagtgtttgaagataata
agctgttctccaccagaagtgaaaagccctgcgaataggtcagcgcttgctaaagcaaat
aacaaaactggtcggcttaatctgcagagtacagagtttttaagagctgagaaaactgat
ggttccccttctaaaactcacgtgggtaaagaaaatgcacctttaaagcaaatttcatcc
cacttgttttccaaaaacctcattaagaacacaaactcttctcgcaataatacctgtcca
ggcagctgcagtgcaagtaatgaggaggaaacagttttcactcaaattgctgaacagaaa
gattgcattcgcttgaacttctgtgacaaacgatctgaaagcaaaacccaagcccacctt
ccagcttccagctgcacgaccaccttaaagtcggtggataaacgagatgccgttgctggg
agattccttgcagtcccagattgggaggctgggaaagcagcaggtgttccgctcgatgtg
ctggatgaaaagccttgtccgaaggggagtgttgattcggaatcagctgcccctgcagag
gacgacccagggtatgtggaggcatgctggtttgatgatgtcatggagcagagggatcca
gaacctgaggagaagtcgtctgatctgaagaagaagaaagcaatccctgattatgctgtt
ctgagtcgaggtctgcacaacagatactgggttgtgtctgtgaaggaggtgccgggcctg
aaggggtaccctgagaaacacttgagcatcacagcctcccagtgcgcagaacacaccgag
ctctgcatcctccaggatgactgggagtcggctccagtgaaacaaggtgacatcattcac
ctggagggggagtgcaactctgatacctgggtgctgcacagggatgctgggtatctggtt
ttaactccagacctgctcatctctggaaccagcatcgctaacagcatacgctgcatgaga
cgagcggtgctgagtgaacggttcaaggcctttgacaaaggcatgaagcagatgctggtt
ggcaccattgttcacgaaatcttccagaaggcagctgtttcctacgggtttgcagatgat
agactgcaggagttaacttccaaaactcttcttgggcccaagtaccttggagaaatgtac
agcctaaagctaactcaagtggatgtgagacaggaaatagaggagtacttgccttcgctc
tcaagctgggcgaggcattactttcacacgtcccctgaggctggcaagagacaactgcag
cttcagctcccaagcgatggaaaactgagccaacaggatgcggccagcactgtcacagtc
acggagttcctggatatcgaagagaacatttggtcccctcggttcggcttgaaggggaag
gtggacctcacagctggtgtgaaaatccaccgcagatcgagaaaccgtcagcttgttatg
cccctggagcttaaaaccggcaaagaatcaaactccattgagcatcgtagccaggttatt
ttgtacacactcatgagccaagaacgcaggacagaccccgaagctggattcctggtatat
ctcaagactggcaacatgtaccctgtcccgggcacccacatggatagaagagagctgctg
aagttaaggaatacaatggcctactaccttaccaacactgtagagcatgacgagaagcag
gcaccacgcccggcaccactgcctcctgttataaatgacagacaggcctgcaagttctgc
tctcagatacgaaactgtgcactttacagcagtgctgtagaaagagagagagggcagctt
ccccccgaagacatgcagtcttttctgaatcaggagagtcaacacctcaaggagacacac
ttccagtacttcagccactggtacctgctgtgtgcgctggagagtcagaccatggagcgc
aaagggggccgcaagaatatatggctgcgttcagctgaggagagagagaagaacggtggg
tgtgttgcaggtgttgtccggacaggccacgtccaagctgtttcagacacccagtacctg
cataattttcagagcagaagtggcgtgatttccgagagctctctggcggtgggtgatcga
atcgtggtgagcgaccagcagaagaagctgattgccttgtctgcggggtacatcactgac
gtgagccgggccatgataagctgcacactagaccgaaatctttcgaagcaccccttggac
actgtgttcagactggaccaggacgaggggattggaggcatggacacacatctgggaaac
ttgtccaagctcatggagaactcctcttccagtgggaagcttagagaactgattgtagaa
ttccgaccccctcagttcattcagcatctgagcagtgtattgcctcgcgaagccaaggac
actgtggccaacatcttaaagggactgaataaaccgcagaagcaggctatgaaacgagtg
ctgctttccaaagattatactcttatagtgggaatgcctgggactgggaaaacaactacc
atatgtactttggtgagaattctccacgcctgtggtttcagtgtgctcgttaccagctac
actcactcagccgttgacaacatccttctcaagctgtgcaagtttcaaattggttttctg
cgtctggggcgacttcagaaggtccaccctgacatccggagcttcacggacgaggagatg
tgccgacggagatgtgttcaaaccctgccacaactagaagagctgtataacagtgagctt
gtggtggcgaccacctgtatgggtgtgaagcaccccatcttcagccggcgacgcttcgac
ttctgcatcgtggacgaagcctctcagatcagccagcccatctgtctgggccccctcttc
ttcgctgaccgttttgtgctggttggggaccatcagcagctgccgccgatcgtccaaaac
acagaagccagggctcttggcatggatgaaagtttgtttaaacgtctggagcgcaacagt
gatgcggtggtccagctgaacgtgcaatacagaatgaacagcaaaataatgtctctgagt
aataagctggtgtatgaaggcaggctggagtgtggctctgagagaacagcctccggtgtg
gtccagctgcctaggagaagctctctggagctggagttaactgcaggctgtgctgaaagc
tcctggttaagagaaactctggagccaaaccaccctgtctgcttcctgaatacagtagag
gttcctgctccggagacagcagaacaaggtggaataagcaatgttacagaggcggcattg
gtgcgctgcatagtaaccatgctgctaaaggctggatgcaaagcgtccagtattggggta
atcgctccgtacaggcagcaggtgcggacgatctctgcctggctggcaggccctgggttc
agtgcagtggaggtgaacactgttgacaagtaccagggccgagacaagagcgtcatcatt
gtgtcttttgtgaggagcagtgatgggaatcttggagaacttctgaaagactggcgtcgt
ctcaatgtggcgatcacaagagcgaagcataagctaatcatgctggggtgtgttccagtg
ctgctccgctatacacccctggagagactactgcgtcacatggaaaacgaacacatgata
tccttttag
DBGET
integrated database retrieval system
