Polyodon spathula (Mississippi paddlefish): 121325246
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Entry
121325246 CDS
T07273
Name
(RefSeq) nocturnin-like isoform X1
KO
K18764
nocturnin [EC:
3.1.3.108
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121325246
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.108 nocturnin
121325246
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121325246
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
121325246
NCBI-ProteinID:
XP_041123582
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All DBs
Position
1:complement(98604388..98617270)
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AA seq
450 aa
AA seq
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MYRRPVRQFSTLLQRDIPVLCSSSLGAGSPVRRAVGLKLSAPPAAVFCHTVCMESLTTSE
AATAVTATNRKPPLPVPMCSRTVCSMGSSTSRLYSALAHTLNSSPAPQHEEYSEQPVHVV
PINPEDLLKECETVLHNRPARVQRAFAFPRNNMPSTHHQPIRVMQWNILAQALGEGKDNF
VQCPLDALNWAERKYLILEEILMHRPDILCLQEVDHYFDTFQPILNSMGYHSSFLPKPWS
PCLDVEHNNGPDGCALFFNQDRFELVDSTNIRLVAMMLKTNQVAIAQTLRCKETGRMFCV
AVTHLKACSGWERFRSSQGSDLLKNLKSITEGTGIPLLICGDFNAEPTEEVYRYFATSSL
NLNSAYKLLSEDGQCEPPYTTWKIRPSGESCHTLDYIWYSQHAFSVDSVLDLPTEEQIGP
NRLPSYNYPSDHLSLVCDFSFNDDFYNRLL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggcgtccagtccgacagttttcgaccttgctacagagagatatcccggtactt
tgttcctcttcattgggggcagggtcacctgtgagaagagcggtcgggttaaagctttct
gccccaccggctgctgtgttctgccatacagtttgtatggaaagtttaaccaccagcgaa
gcagcgactgcagtcacggctaccaaccgaaaacctcctttgcctgtgccgatgtgctca
agaacagtgtgttccatgggcagcagcaccagcaggctgtacagcgccctggcccacacg
ttaaacagcagtcctgctccccagcatgaggagtacagcgagcagcctgtccatgtggtg
cccatcaacccagaggacctcctcaaggagtgcgagacagtcctgcacaaccggccggcc
agagtgcagcgagcctttgccttccctagaaacaacatgcccagcacccaccaccagcca
atcagagtcatgcaatggaacatcctcgcacaagctcttggggaaggaaaggacaatttt
gttcagtgtccactggatgctttgaattgggcagagcgcaagtacctcatccttgaggag
attctcatgcacaggccagatatcttgtgcctgcaggaggtagatcactactttgatacc
ttccagcctatcctgaacagcatgggctaccactccagcttcttacccaagccctggtcg
ccctgcctggatgtggagcacaacaacggaccagatggctgtgctttgttctttaaccag
gacaggtttgagctggtggacagcactaacatacgtctggtagccatgatgctgaagacc
aaccaggtggctatagctcagaccctgaggtgcaaggagacagggaggatgttttgtgtt
gccgtcactcacctcaaagcttgcagtggctgggagaggttccgctcttcccagggctct
gacctccttaagaatctgaagtccatcacagaggggactggcatccccttgctgatttgt
ggggacttcaatgcagagcccactgaggaggtctatagatactttgcaacctccagcctc
aacctgaacagcgcctacaagctgctcagcgaggacggccagtgtgagcccccctacacc
acatggaagatccgcccgtctggggaaagctgccacactctggattacatctggtactcc
cagcatgccttcagcgtggactccgttctggacttacccacagaggagcagatcggaccc
aataggctgccatcctataactatccttcagaccacctatcgctagtctgtgactttagt
tttaatgatgacttttataacagacttttatag
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