Polyodon spathula (Mississippi paddlefish): 121325280
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Entry
121325280 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04115
p53 signaling pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04137
Mitophagy - animal
pspa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121325280
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121325280
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121325280
09143 Cell growth and death
04115 p53 signaling pathway
121325280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121325280
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121325280
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121325280
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
121325280
NCBI-ProteinID:
XP_041123648
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All DBs
Position
13:44577655..44587538
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AA seq
315 aa
AA seq
DB search
MTGKATLHCLYSWKGVLELFTCLSGNKASTSKEMSRQTATALPTGTSKCAPSQRVPALQG
TTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAM
EKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPH
LMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFA
IVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLF
AENGNLGINVTISMC
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtaaagctacattacattgtctgtactcatggaaaggagtccttgaactgttt
acatgcctatcaggaaacaaagcaagcacaagtaaagaaatgagtcgccagactgccaca
gcactcccaacaggtacatcgaagtgtgctccatcacagagggtgcccgcgctgcagggc
accacagcttccaacaatgacttggccagtctctttgagtgtcctgtctgttttgactat
gtactgccacccattcttcagtgccagagcgggcatctggtttgcagcaactgtcgcccg
aagctcacgtgctgtccaacatgtcgaggcccactgggctccattcggaacctggctatg
gaaaaggtggccaactctgtactgtttccttgtaaatacgcctcttcaggatgtgagata
acgttgccacacacagagaaagcggaccacgaagagctttgcgagttcaggccttattct
tgcccttgtcctggagcctcgtgtaaatggcagggctccctggatgccgtcatgcctcat
ttgatgcatcaacacaagtctataacaacgttacaaggggaagacattgtctttctggcc
acagacattaatcttccaggagcagtcgactgggttatgatgcagtcctgttttgggttc
cactttatgttggtcttggagaaacaggaaaaatatgatggccaccagcagttctttgct
atcgtccagttgattggaacacgcaagcaggcagaaaactttgcctaccgactcgagctg
aatggtcatcgccggcggctgacctgggaagcaacgcctcgctcaatccacgaggggatc
gccactgcgatcatgaacagcgactgtctggttttcgacactagcattgcacagcttttt
gctgagaatggaaatctaggcataaacgttacaatctcaatgtgctga
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