Polyodon spathula (Mississippi paddlefish): 121325307
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Entry
121325307 CDS
T07273
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121325307
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121325307
04081 Hormone signaling
121325307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121325307
G protein-coupled receptors [BR:
pspa04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
121325307
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Srx
7tm_4
7TM_GPCR_Srv
V1R
Motif
Other DBs
NCBI-GeneID:
121325307
NCBI-ProteinID:
XP_041123674
LinkDB
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Position
13:31054220..31062218
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AA seq
408 aa
AA seq
DB search
MENNSRFETPTNVSLVTGTDSVFRSIEYKTISVFLVLLICGIGIIGNMMVVLVVLTTRHM
RTPTNCYLVSLAVADLMVLVAAGLPNISDSLSGTWVYGHAGCLGITYFQYLGINVSSCSI
TAFTVERYIAICHPMRAQTVCTVSRAKRIIAFVWVLTSVYCMLWFFLVDINVNKDNKVEC
GYKVSRDLYLPIYLIDFAIFYVTPLLMAIVLYGLIARILFLNPLPNRADTTTERWQGKSG
KQKNGSEPGSSKTTNRPQTKRAPSSRKQVTKMLAVVVILFALLWMPYRTLVLVNSFIEKP
YLNAWFLLFCRMCIYANSAINPVVYNLMSQKFRSAFKKLCKCGEEETQRRTMYLTPVNYS
MVRDTVTGSPEVNGKKTDKKQEAEGKGGPSQRLQATVSVDEEIYFSVV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaacagcagatttgaaacgcccaccaatgtctcattggttactggcacggac
tctgtgttcaggtccattgaatacaaaaccatctctgtgtttctggtgctgctcatctgt
gggataggcatcattggcaacatgatggtggtcttggtggtcctcaccactcgtcacatg
cgtacccccacaaactgctacctcgtgagcctggccgtggctgacctcatggtgctggtg
gcggctgggctgcccaacatctcagacagcctctctgggacctgggtctatgggcacgct
ggctgcctggggataacctacttccagtaccttggaattaatgtatcctcctgttccatc
acagccttcactgtggaaaggtacatcgccatttgccatccaatgagagcgcagacagtg
tgcacagtgtcgagagccaagcgcatcattgcctttgtctgggtcctgacctcagtctac
tgcatgctgtggtttttcctggtcgacatcaatgtcaacaaagacaacaaagttgagtgc
gggtacaaagtgtctcgggatctctatctgcccatctacctcattgactttgccatcttc
tatgtcacccccttgcttatggcaatcgtgctctacgggctgattgcgcgcattttgttt
ctcaaccccctcccgaaccgggctgacaccaccactgagcgctggcaaggcaagagtgga
aagcagaagaacggatcagaaccaggcagcagtaaaaccaccaatcgcccacagaccaag
agagctccctcttcaagaaagcaggtcacaaaaatgctggctgttgtagtcatcctcttt
gccttgctgtggatgccctatcgaaccctggtcctcgtcaactccttcattgagaagccc
tatctgaatgcctggttcctcttgttctgccggatgtgcatctacgccaacagcgccatc
aaccctgtcgtgtacaacctcatgtcccagaaattcaggtcggcttttaagaagctgtgc
aagtgtggagaggaggagacacagagacgcaccatgtacttgacgccagtgaactacagt
atggtgagggacacagtgaccgggagccctgaggtgaatgggaagaaaacagacaaaaaa
caggaggcagaaggaaaagggggtccttctcagaggcttcaggccactgtcagtgtagac
gaggagatttacttcagtgtggtttaa
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