Polyodon spathula (Mississippi paddlefish): 121325316
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Entry
121325316 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC121325316
KO
K07375
tubulin beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04145
Phagosome
pspa04540
Gap junction
pspa04814
Motor proteins
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121325316
09144 Cellular community - eukaryotes
04540 Gap junction
121325316
09142 Cell motility
04814 Motor proteins
121325316
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121325316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121325316
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121325316
04147 Exosome [BR:
pspa04147
]
121325316
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121325316
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121325316
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121325316
Exosomal proteins of colorectal cancer cells
121325316
Exosomal proteins of bladder cancer cells
121325316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
7tm_1
7tm_4
7TM_GPCR_Srsx
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
121325316
NCBI-ProteinID:
XP_041123681
LinkDB
All DBs
Position
13:34673720..34702849
Genome browser
AA seq
944 aa
AA seq
DB search
MNFTTFNPLVMKHVASENNSDNATSNASYSNTTTLACNKIIIPHELFLTIGLLSLLENIL
VVLAIIKNRNLHSPMYYFICCLAVSDMLVSVSNVVETMFMLLIDRGVLVVTFNIIRNMDN
IIDMMICSSVVSSLSFLGAITADRYITIFYALRYHSIMTTQRAVAIIIAIWVASTISSTL
FITYYKNNAVIICLITFFLFMLILMAAMYLHMFTLAHLHAKRITAFYKNRRQNQATSMKG
AVTLLILLGVFLICWGPFFLHLTLIVTCPKNPYCLCFFNHFNLFLILIICNSFIDPIIYA
FRSEELRKTLKELLICSWXLMLCSSLHHLGVELPLRLMRALPQEEVRCQIFHPQPVGTKP
QVQDGEKATVLFRYQEVSRVEPLSGRSGIYETNGTLVQQGCHFGLLIIAQDVIRRRDVAV
FLSAGPDWALPHPCPGENYVSCSLKLASLFLRQCSITRSNIKTPRLYFHSLLLPAYLEPH
PKICICTGLTITPEGRMREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGNYVGDSDLQL
ERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKG
HYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIM
NTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGD
LNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRAL
TVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQNKNSSYFVEW
IPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMD
EMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDDEESEAQK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcactacatttaatcctttggtgatgaaacatgttgcttctgagaacaactca
gacaatgcgaccagcaatgcttcctacagcaacacaacgactttggcgtgcaacaaaatc
attataccccatgaactctttttgactattgggcttctgagtctcctggagaacattttg
gtggtgttagccattattaaaaacaggaacctccattctccgatgtactattttatctgt
tgtcttgccgtgtctgacatgctggtgagcgtcagcaatgtggtggaaaccatgttcatg
ctgctgattgatagaggggtcctggtggtcactttcaacatcatcaggaacatggacaac
atcattgacatgatgatctgcagctctgtggtgtcctcgctctccttcctgggtgcaatc
acggcagaccgctacattacaattttctatgccttgcggtaccacagcatcatgaccact
cagcgggctgtggccatcattatagccatctgggtggccagcaccatctccagcacactt
tttatcacctactacaagaacaacgctgtcatcatctgcctcatcaccttcttcttgttc
atgctcatcttgatggcagccatgtacctccacatgttcacccttgcccaccttcatgcc
aagcgcatcactgccttctacaagaaccgacgccaaaatcaggccaccagcatgaagggg
gcagtcaccctgctcattttgctgggggtattcctcatatgctggggtccattcttcctc
cacctaaccctgattgtcacctgtcccaagaacccatactgcctctgctttttcaaccac
ttcaacctgtttctaatactgatcatctgcaattcatttatagaccccattatctatgcc
ttcagaagtgaagaacttcgaaaaacgcttaaggagttgctaatttgctcctggtagttg
atgctttgctcttcgctccatcacctgggggtggagctgccactccgattgatgcgggcc
ctccctcaagaggaggttcgctgccagattttccacccccagcccgtagggacaaaaccg
caggtccaggatggggagaaagccaccgtcctgtttcggtaccaggaagtatctcgagta
gagcccctctccgggagaagtgggatctatgagacgaatggcacgcttgtccagcaaggc
tgccacttcggtctgctcatcatagcacaggatgtgattaggcgcagggatgttgcagtg
tttctctctgctggtcctgattgggcattgcctcacccctgtcctggcgaaaattacgtc
agctgctcgttgaaattagcatctctctttttgaggcagtgcagcatcacaaggagcaat
ataaaaaccccgagactgtactttcacagtcttctcctgcctgcctacctggaaccgcat
cccaaaatctgcatttgtacaggactcactatcacaccagagggaagaatgagagaaatt
gttcacattcaggctggccaatgtggcaatcagattggagctaagttctgggaggtgatc
agcgatgaacacggaatcgaccccactggaaactatgttggagactcggaccttcagctg
gagagaatcagtgtctattacaatgaggcctcatctcacaaatatgtacccagagccatc
ctggttgatctggagcctggaaccatggacagtgtccgctcaggggcctttggtcacctc
ttcagaccagacaacttcatcttcggccaaagtggagcaggaaacaattgggccaagggc
cactacacagaaggcgctgagctggtggactcggtcttagatgtggtgaggaaggagtgt
gagaactgtgactgtctgcaaggcttccagctcacccactctctgggagggggcactggc
tctgggatgggcaccctcctgatcagcaaagtgcgggaggagtaccctgaccgcatcatg
aacactttcagcgtagtgccttcccccaaggtgtcagacacggtggtggagccatacaac
gctaccctgtccatccaccagctcgtagagaacacagacgagacctactgcattgacaac
gaagccctctatgacatctgctttaggaccctcaagttggccacccccacgtacggagac
ttaaaccacctggtgtctgccaccatgagtggtgttaccacttccctgaggttccctgga
cagttgaacgctgatctccgcaagctggcggtcaacatggtacctttccctcgtctgcat
ttcttcatgcctggctttgcccctctgactgcccgtggaagccagcagtaccgtgccctc
actgtgccagagctcacccagcagatgtttgatgccaagaacatgatggcagcctgcgac
ccacgccacggccgctacttgacggtagctactgtcttccgtggccgcatgtccatgaag
gaggtggacgagcagatgctggctatccagaacaagaacagcagctactttgtggaatgg
atccccaacaatgtcaaggtggccgtctgcgacatcccaccaagagggctcaagatgtct
tccacttttatcggcaacagcacggccatccaggagctgttcaagcgtatctctgagcag
ttcacagctatgttcaggcgcaaggctttcctgcattggtacactggagagggcatggat
gagatggagttcactgaggccgagagcaacatgaacgatctggtttctgagtaccagcag
taccaggatgccactgctgaagaagaaggtgaaatgtatgaagatgatgacgaagagtcc
gaagcccaaaaatga
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