Polyodon spathula (Mississippi paddlefish): 121325329
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Entry
121325329 CDS
T07273
Symbol
sclt1
Name
(RefSeq) sodium channel and clathrin linker 1
KO
K25400
sodium channel and clathrin linker 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121325329 (sclt1)
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121325329 (sclt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0242
SOGA1-2-like_CC
PurL_C
Motif
Other DBs
NCBI-GeneID:
121325329
NCBI-ProteinID:
XP_041123693
LinkDB
All DBs
Position
1:100820725..100849371
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AA seq
687 aa
AA seq
DB search
MAASEVEFLRDQVQRLSSALRQYQEGHHSQSASVQGGLLGENESPATWLTDKSLMAPLIA
EYDRHVEDMSEQLQYYKTQMGEMKLKLENVIKENERLHAELRESIEKQLQFLPSGSGLES
DSLPEGGVIANLQEQIQLSNQEKEQALELWQSVAQELDRLQQLYQKTMAEAQIHVAERQQ
LKDQLAHVQQLAQQLQLANQKLESTNQQFLKTMTEQSSELEQLRTQQRHAKLDLRTATTK
VEEMTKIMENLQEQMQRREEDVLSAQGREEASDRRLQQLQSSIAQLETRLKVAVQEAEQF
RKERTAWERQIGELQGKCAGLDEEKYEAVSKVRDSIQLVEETTLQKDQALLREKQKDEEV
EKMKEAMARLIQDAAVRTRKEVENVRKQCNVQIYRLAEELSALQLECGNKEGQIERAIRE
KRAVEEELEKMYREGRGTEADYRKMDELHQRCLNAERAKDDLQITLQAMQNKIRKLEMIS
EEEMSRCQETIGKLQGTVEVIRGDCDTVSEERLRLLQENDRLRKEMEELRKSSLEVQRKA
KQQVLAMEHDHSMKECSLEARVRELEDSSRKSTNELNRLLMAQQKTTKRWKEEARKLTEA
FEVQLNNLKSELSRQKQRSQELVVQLQTEHENILEYEKLTAEYQEKASRLQKRLLQAEQR
ASTASQQLSKITSQRRPPPSIMDLETV
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcagaagtagaattcctgagagaccaagtgcagaggctgagttctgctctc
cgacagtaccaagaaggacatcactcccagtcagcatcagtacagggaggactacttgga
gaaaatgaatctcctgctacttggctcacagacaaaagcctcatggcacccctcatagca
gaatatgacagacacgtggaagacatgagtgagcagctgcagtactacaagacacaaatg
ggtgagatgaagctgaaactggaaaatgtaataaaagaaaatgaaaggcttcatgcagaa
ttgagggaatcgatagaaaaacaattacagttcctaccttctggatctggccttgaaagc
gattctcttcctgaaggtggagtcattgcaaatctccaagaacaaatacaactgtctaat
caggaaaaggaacaggcactggagttgtggcagtctgttgcacaagaactcgatcgactg
cagcagctgtaccagaagacaatggcagaagcacagatccatgtggctgagaggcaacaa
ttgaaggatcaactggcacatgttcaacagcttgctcagcagctccaattagccaatcaa
aagctggagtcgaccaaccagcagtttctgaaaaccatgacagagcagagttcggagctg
gagcaacttcgcacccagcagagacatgcaaaattagacttgagaacagctacaacaaaa
gtggaagaaatgacaaagataatggagaatcttcaggaacagatgcaaagaagggaggaa
gatgtgttgtcagcccaggggagagaggaggcttcagacagacggttgcagcaactgcaa
tcttctatcgcccagttagaaaccagattgaaagtggctgtccaggaggctgaacagttt
agaaaagagaggactgcttgggagagacaaatcggagagctacagggaaagtgtgccggg
ctggatgaagagaagtatgaagcagtttcaaaggttcgagacagcattcagctggtggag
gaaacaactctgcagaaagatcaggcccttctgagagaaaaacagaaagatgaagaggtg
gagaaaatgaaagaagcaatggctcggttaattcaggacgcggcagttcgaaccagaaaa
gaggttgaaaatgtaagaaagcaatgtaatgtgcaaatctacagattggcagaagaactt
tctgctttgcaactggaatgtggcaacaaggaaggacagattgaaagagcaattcgggag
aaacgagctgtggaagaggaacttgaaaagatgtatcgcgagggccgaggcactgaggca
gattacagaaagatggatgagctccaccagagatgtctcaatgctgaacgtgccaaagat
gatctgcaaataactctgcaggcaatgcagaacaaaatcagaaaattagagatgatctct
gaggaggagatgtctcgctgtcaggagaccattgggaagttgcagggcactgtggaggtg
atccgaggggactgtgacactgtcagcgaggagaggttgaggcttctgcaggagaacgat
cggcttcgcaaggaaatggaggagttgagaaagtccagccttgaggtgcagaggaaggca
aagcaacaggtcttggcaatggagcatgatcattcaatgaaggagtgcagtctggaagca
cgcgtgagggagctagaggacagcagccgcaaatcgacaaacgaactgaaccgcttgctg
atggctcagcagaaaaccaccaagcgctggaaggaggaggcccggaagttgacagaagcc
tttgaggtgcaattaaacaacctgaagagtgaattgagtcggcaaaagcaacgctcccag
gaactggttgtgcagctccaaacagaacatgaaaatattttggagtatgaaaaactaaca
gctgaatatcaggagaaagccagcagactacaaaagcgcctcttgcaagcagaacagaga
gcatccacagcttcccaacagctcagtaaaataacatcacagagaagaccaccaccctcc
atcatggatctggagactgtgtga
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