KEGG   Polyodon spathula (Mississippi paddlefish): 121325346
Entry
121325346         CDS       T07273                                 
Name
(RefSeq) paraplegin-like
  KO
K09552  spastic paraplegia 7 [EC:3.4.24.-]
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pspa01002]
    121325346
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pspa03110]
    121325346
Peptidases and inhibitors [BR:pspa01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   121325346
Chaperones and folding catalysts [BR:pspa03110]
 Other chaperones and cochaperones
  AAA proteases
   121325346
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_5 AAA_17 nSTAND3 RuvB_N AAA_22 AAA_2 TIP49 PglZ AAA_16 AAA_28 Mg_chelatase IstB_IS21 AAA_14 NACHT DUF8203 ABC_tran NPHP3_N
Other DBs
NCBI-GeneID: 121325346
NCBI-ProteinID: XP_041123710
LinkDB
Position
13:complement(37363905..37374187)
AA seq 816 aa
MLMQLTSRTCSAVRSSSIWALTAQKRILHLGNDYTQPFNKYTNNISPSKYNVCKNCGLKR
NFQLSSRHQDQRRYVSTGILQQILHKPLTPRFQGVCKSLIKQQLGRDPVGLWRLLGGTSY
FSTSRPKQDKNSNDGAKGKTPEEDEEEKKRREREDQMYRERLRTLFIIAVIMSLLNSINT
SGGNISWNDFVNEMLAKGEVSRVQVVPESDIVEIYLHPGAVIFGRPRLALMYRMQVANID
KFEEKLRAAEDELNVDTKDRIPVSYKRTGFFGNALYALGMAAVGVAILWYIFRLAGMTGK
DGGFSAFNQLKMARFTIVDGKSGKGVSFKDVAGMHEAKMEVKEFVDYLKHPDRYLLLGAK
VPKGSLLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARAR
APCIVYIDEIDAVGKKRSTNSSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADI
LDNALMRPGRLDRHIFIDYPTLQERREIFEQHLKNLKLTQSASFYSQRLAELTPGFSGAD
IANICNEGALHAAREGYKSIDTFNFEYAVERVIAGSVKKSKILSKEEQRIVAFHESGHAL
VGWLLEHTEAVMKVSIAPRTNAALGFAQILPRDQFLFTTEQLFERMCMALGGRVSEAITF
NKVTTGAQDDLRKVTRVAYSMVKQYGMVPSVGQVSFPDTEEEGAVGRRPFSQGLQEQMDH
EARMLVARAYRHTEKLLLDNRDKLIMLANALLEREVVNYDDIEALLGAPPYGPKKMIAPQ
TWIEAEKDKQDTGEEEPRRKPQRRKEEDDEANYRPV
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgcttatgcaactaacaagcagaacttgcagtgctgttaggagcagctcgatttgggct
ttgacagctcagaaaagaattcttcatttgggaaacgattacacacagccttttaataaa
tatacaaataatattagtccgagtaagtataatgtctgcaagaactgtgggttaaaaagg
aattttcagctcagttcgagacatcaagatcaacgtcgttatgtcagcactggtatttta
cagcaaattcttcacaaacctctgacccccagatttcaaggcgtctgtaagagcttaata
aaacaacagcttggtcgagatccagttgggttatggagacttttaggagggacttcttat
tttagcacctctcgacccaagcaggacaaaaacagtaatgatggcgctaaagggaaaact
ccagaggaggatgaagaggagaagaagcggcgtgagcgagaggatcagatgtacagggag
cgtctgcggacactgttcatcatcgcggtcatcatgagcctcctcaactccatcaacacc
agcggaggcaacatctcctggaacgactttgtcaacgagatgctggctaagggcgaggtg
tcccgggtgcaggtggtgccagagagtgacatcgtggagatctatctgcaccccggggcc
gtcatcttcgggaggccaaggctggccctgatgtatcggatgcaggttgccaacattgat
aagtttgaggagaagctgcgagcagctgaggacgagttaaacgttgacacgaaggacagg
atccctgtgtcctacaagcgcactggattcttcggaaatgctctttatgccctggggatg
gcagctgtgggagtggcaattctctggtacatcttccgactagcagggatgacgggcaag
gatggtggatttagtgcattcaaccagctgaagatggctcgcttcaccattgtggatgga
aagtcagggaagggtgtgagtttcaaagacgtggctgggatgcatgaggccaagatggaa
gtgaaagagtttgtggattacttgaagcacccagatcggtacctcctgctgggggccaag
gtgccgaaggggtctctccttctgggacccccaggctgtgggaagacactactggccaag
gctgtcgccaccgaagcccaagtcccctttctcgccatggcaggatcagagtttgtggag
gttattgggggtctgggtgcagcacgtgtgcgcagcctgtttaaagaagcccgcgcccgc
gccccctgcatcgtgtacattgatgagatcgacgctgtcgggaagaagcgctccaccaac
agctcaggcttctccaacactgaggaggagcagaccttaaaccagctgctggttgagatg
gacggaatgggaacgacagatcatgtgatcgtgctggcatccacaaacagagcagatatt
ttagacaatgcactgatgagacccggccggctcgatcggcacattttcattgattatcct
actctgcaggagagaagagagatctttgagcagcacctgaagaacttgaagctcacccag
tcagccagcttttactcccaacgtttagctgagctcacaccaggattcagtggagcggac
atcgccaacatctgcaacgaaggagctttgcatgcggcccgagagggatacaaatcaatc
gacactttcaactttgagtatgctgtggagagagttattgcaggcagtgttaagaagagt
aagatcctctctaaggaggaacagaggattgtggcatttcacgaatctggccatgcgctg
gtgggctggctgctggagcacacagaggctgtcatgaaggtctccattgccccccggacc
aacgctgcgctggggttcgcccagattctgccgcgggaccagtttctcttcaccaccgag
cagctgtttgagagaatgtgcatggctctgggaggccgggtctcggaggccatcaccttc
aataaggtcactacaggggcgcaggatgacttgcggaaggtgacccgcgtggcctactcc
atggtgaagcagtacggcatggtgcccagcgtgggtcaagtctccttccctgacaccgag
gaggagggggccgtggggcgcagacccttcagccagggcctacaggagcagatggaccat
gaggccaggatgctggtggctcgagcgtacagacacacagagaaactgctgttagacaac
agagataaactgattatgctggccaatgctctgctggagcgggaggtagtgaactatgat
gacatcgaggcgctgcttggggctcccccgtatggccccaagaagatgattgctccccag
acctggatcgaggctgagaaggacaagcaagacacaggggaggaggagccaaggaggaag
ccacaaagacgcaaggaggaagatgatgaagctaactacaggcctgtttaa

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