KEGG   Polyodon spathula (Mississippi paddlefish): 121325434
Entry
121325434         CDS       T07273                                 
Name
(RefSeq) WD repeat-containing protein 88-like
  KO
K24757  WD repeat-containing protein 88
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:pspa04990]
    121325434
Domain-containing proteins not elsewhere classified [BR:pspa04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   121325434
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_NWD2_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_Nup120_160 Ge1_WD40 WD_LRWD1 Beta-prop_SCAP Beta-prop_WDR19_1st Cytochrom_D1 Beta-prop_WDR75_2nd WD40_like PQQ_2 WDR54 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_DCAF12 Nucleoporin_N eIF2A Beta-prop_HPS5 zf_Tbcl_Rhp7
Other DBs
NCBI-GeneID: 121325434
NCBI-ProteinID: XP_041123836
LinkDB
Position
13:complement(32910917..32921349)
AA seq 400 aa
MSTDISKIDPLALDEDIQVKKGGKKGTASWEHQELSQILIKVIRGHSDEVSCCHFCFEDS
KILTCSHDKTAKLWDIDNGAPLHVYDGGHSAPIIKCALTPDNKRLFTASWDKTVKAWDVE
TGCILWAFFHDGIVTSFDVSSDGKYVVSGSDAKYTLHLIDAETGTELCHLEDHHRSTITC
CRIDPDSQRVASVSSDKTIKLWDLETKRTTIFINKSGHGNVISDCSFSPNGRYLCTASWD
KSLRLWDIKTGEFRTQGAVTLDEGHAGNISSCAFSKDSSVLVSGSYDKTVVVWDMAGACK
KLVLKGHADWVTDVDISSDKKWILSSSKDSSVRLWNIENSDHIPAVIETRKAKGLKIVKC
EECGKPFSITQMEDSEFISKCVFCRLASPSRYYLPSPPTL
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgtctactgacataagtaaaatcgaccctcttgcattagatgaagatattcaagtaaag
aaaggtggtaagaagggaaccgcgagctgggagcatcaagagttatctcagatcttgatc
aaagtgataagaggccattcagatgaagttagctgttgccacttctgtttcgaagacagc
aaaatacttacatgttctcatgacaaaacagcaaaactctgggacattgataatggggct
cctttgcatgtctatgatggaggacacagtgctccgattattaaatgtgcactaactcct
gacaacaaaaggctgttcactgcatcctgggataagacagtaaaagcttgggatgttgag
acaggatgcattctttgggctttttttcatgatggcattgttacctcctttgatgtttct
tccgatgggaagtatgtagtatctggctcagatgcgaaatacaccctccaccttattgat
gctgaaaccggtacagagctgtgtcaccttgaagaccatcatagaagcacaataacctgc
tgtcggattgaccctgacagccagcgtgttgcttctgtatcctctgacaagaccataaaa
ctctgggatcttgaaacgaaaagaacgactatctttattaataaaagtggccatggcaat
gtaatctcagactgcagcttcagcccgaatggccgttacttgtgtactgcttcgtgggat
aaatccttacgactatgggacatcaaaacgggagagtttcgcactcaaggagcagtgacc
ctggacgagggtcatgcaggcaacatcagctcctgtgcattctctaaagattcatctgtt
ctggtatctggttcctatgataaaaccgtagtagtctgggatatggcaggagcatgtaaa
aagcttgtcttaaaggggcatgcagactgggtgacggatgttgacataagttctgacaag
aagtggattctgtccagctctaaggactctagtgtgcgcttgtggaatatcgagaattca
gaccacatcccagcagtgattgagactcgaaaagcgaagggattaaagatagtgaagtgt
gaagaatgtggaaaacctttttcaataacccagatggaagactctgagtttatttctaaa
tgtgtattctgccggctagcctctccttccagatactatctgccatcaccacctactctt
tga

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