Polyodon spathula (Mississippi paddlefish): 121325452
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Entry
121325452 CDS
T07273
Name
(RefSeq) tumor necrosis factor receptor superfamily member 3-like isoform X1
KO
K03159
lymphotoxin beta receptor TNFR superfamily member 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
pspa04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121325452
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121325452
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pspa04050
]
121325452
Cytokine receptors [BR:
pspa04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121325452
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
121325452
NCBI-ProteinID:
XP_041123867
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Position
13:complement(28150542..28175514)
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AA seq
410 aa
AA seq
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MFGCFSVHLCLWFWILLVVEAAPGQTFPYVPENGYCTDSRTEYLSAGVCCRRCAPGQFAL
HKCTAVSDTHCSSCPENTFTELYNYAPNCRLCRPCEAGLVVSSPCTKTRRSVCGCPENSI
CIRVQPWECEFCEDHKPCQPGTYTSQIGDMERHPQCSPCPTGFFNDRPSVTALCFRHSNC
TELGKVQTKPGTSESDAVCKDSMVGKDTGWLGFMILLVVPAMLVIVGAIIGGGLRMKHQH
SDKDHTPSSGRDSEQSNLLSPSGSVISSTSSIPQFPAPSAGSPPPLIAVPYSLTALQGAE
HETHSGASIGLEGDREASQQERLCQLPFIGEMKVSGNVYIYNGPVVNQASPSSDQCSDSS
PPPSSSLPVSQFRLPVQEEQSAVPVQELQGAPLQESGKEFHITIEETNSY
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctgtttctcagttcacctctgcctgtggttttggattctgcttgtagttgag
gcagctcctgggcagacttttccatatgttccagaaaatggttattgtactgattcaaga
acagaatatctctctgctggagtctgctgccggaggtgcgcaccaggtcagtttgcactt
cacaaatgcacagccgtgtccgatactcattgcagcagctgtccagaaaacaccttcact
gaactctataactacgcacctaactgcaggctgtgcagaccttgtgaggctggtctggtt
gtgtcgtccccttgtaccaagaccaggaggagtgtctgtggttgtcctgaaaacagcatc
tgtatcagagtgcagccctgggaatgtgagttctgtgaagatcacaaaccatgccagcct
ggtacctacacatcacaaataggtgacatggagcggcacccccagtgttccccctgcccc
actggcttcttcaatgaccgaccctctgtcacagcgctctgcttccggcacagcaactgt
acagaattggggaaagtgcagacaaaaccagggacgtccgaatcagatgctgtgtgcaag
gactccatggttggcaaggatacaggctggctggggttcatgattctcctggtagtccct
gccatgctggtcattgttggagccatcattggtggtggtttgagaatgaaacatcagcac
agtgataaagaccacaccccaagctcaggcagggactctgagcagtccaatttactgtct
ccaagtggaagcgtaatctcctcgacctccagcatcccacagttccctgctccatccgca
ggctcacccccccccctcatcgccgtaccttattcgttgactgctctgcagggggcggag
catgagacacacagcggggcttccattggtctagagggcgacagggaggcgagtcaacag
gagaggctgtgtcagcttcccttcattggagagatgaaggtcagtggaaatgtctacatt
tacaacggtcctgtcgtgaaccaggcttctcccagctcagaccagtgcagtgactccagc
ccccctcccagctcctctcttccagtctcccaattcaggctgccagtgcaggaggaacag
tctgcagtaccagtgcaggagctgcagggggctccactgcaggagtcagggaaggagttt
cacatcaccatagaggagacaaactcgtactga
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