Polyodon spathula (Mississippi paddlefish): 121325474
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Entry
121325474 CDS
T07273
Symbol
plekhg4
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121325474 (plekhg4)
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
121325474 (plekhg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
CRAL_TRIO
RHG20_PH
IQ_SEC7_PH
PH_10
CRAL_TRIO_2
Motif
Other DBs
NCBI-GeneID:
121325474
NCBI-ProteinID:
XP_041123905
LinkDB
All DBs
Position
13:42360588..42416466
Genome browser
AA seq
2183 aa
AA seq
DB search
MDCDSLDSCIQSTLSALYPPFEATAGTVLCQVFDVVEKTYRGDGLRYLIDFLLPSKHILQ
CIQQDACVQYCGNLFRHEGWPLCIHEKIVVHLASLDWRSLQPGDFYLQAVPYLKNTPRIV
LKCLARDGHNVEELEVPEITYTSIFTTEWLDSINQERMGTALEHCLLSTDSNIFRVPWEE
VVRPEFRNKPRMIENVSGIARASGDGTCPKALQESQRLANSSGPSASKGQMQKGPDIRRT
SSQPCFDAVNWLDLSDNMSEEFDQDLEGEYVELADFPLPRFFPQKGSLTESISLNYRNRN
KPKTFLEAKTSDCQNNSTCLQTLICTNLIEQNLNAPSGFCSKSTSTSIGIRTGSPAEEGK
VNGAVGARVDSTLNDMEGITQEIVTAVPDSGSLKEPGCISGVPDVQGCEESSTLNKGLPS
HSSSCNTHSPSHGIQTDFSDNLLSCESNSDDLQECRGIPEREKGVVVVVVESGNSRPLIT
TDMMHSLRDTHDRACDENDSALINASPASFTEQSQQQAHTQREYSSDCGQLLTQSVDPQH
KANPIPEHINPLCEPSDVSTAAASPLLFSADRAVSSQKTHGDELEPGLSHFKSTSKEQVG
CSAEVQDRDCVNGRVCNGEERPQEADLVSKDSASVESTETEEPNGNADRAGHKGVMHGHS
TQTTSHSQLALSHSGTPDEDGVSPASTGDRDAKEIGCPLQEASCREASDQVETEHKPSTV
TGEDRSMECATESSEIPFSNSAVDRESAGLHSVSDLTSSERPAGLHIEKNGDESCSDKLA
NTMALEDGRSLPATAAQHQRLEDAVCMGGTGFSETLAQGREEQRNKPEMTLKVIPSSVGG
DQDTSMESHQKGVEEQKEQGAEAPVSPARQLCEAVSREERVVQKHQESLSFVPLSSKLQT
VPTQALDINPAVLDSGVVCLPGTRDRCGRALVIVTTRNTIWLNPNCNSAQLVRLLVYFYT
ILRKAVRTLGLTVLVDARRCSPVPALFKAFNQLQEAVPNCIHTVLLLAERDLTFRMEKPT
AMQFELLTSLKSLHKHMDASQLPLEFDGTFPFCHSDWVCFRTKLEQLVQCCRSAFGFLQV
TIASLESSRVPGTAEEAQVLLLRYRDLMKRVLEDNRLVRLQLEGGATLSRLKKEESCVTL
TEDYRDAIEMVTGLYNQVDESVHRLVMLSNKCMQELEFVIEFKTLEEGFKEVSGWIEQVG
ESRLKKLSELDDSLEQLRCTQTDFRDFYSSAYTYCKNGEGLLKKLEPWEDVSSAELQVYE
VKVHSFWEQLKDFSLRVEDAKGKIDKTVKLYEFFDKAYEWALDGMRHLACITMEDCSMPE
KCGTVIKCLDGYRRQHPDIPEAKFTEMKELAGELKNDRGLKQWKFAWSKCQETKQMFEKK
LEAALRTRRSLPLDRAVSSDEGSVKSCSGANPASRRHSEGSDQRLQHERSHSISYSCSRK
STSGGWTRDRLATHSPGSYYGAGSNGLEDSMAEYVLNRTPTPGRHGFDHRVPGQAGAAPD
SHKLTRSTSSEETGRDTLTAGLQGRASSCSYSLGSGSQQGRRLLRKTQSFEVAPSEGLRY
GTCHRTLSEPARHGNTGVFIKGLEVSSTEIVDRTCTSRQQAPHSWSPSQADEQRSSTPIP
EARVKGSKLRHIVDEMVTTEQEFVRSLHYIIDNYFPEMERPDLPQDLRGKRSVIFGNLEK
LFDFHSQYFLKELESCCNHPLRVSHCFLRHQDQFGMYALYSKNKPKSDALLASHGNAFFR
YKQLQLGDKMDLASYLLKPVQRMSKYALLLKDLIKECSEAQEQELNYLRAAAEMVKFQLR
HGNDLLAMDAIRDCDVNLKEQGQLVRQGEFTVCYGRKKCQRHVFLFEDLVLFSKPKRVVG
GLDVYIYKHSFKTADVGLTENSGDSGLRFEIWFRRRKSKNQTHILQASTPEVKRAWTADV
AKILWQQATRNKEVRMQEMVSMGVGNKPYLDIKPSDAAINDRAIDYIMKGRGARTRASIA
VSLFDHSNPFKRTQTPISGSSAPSACNTPSSSLLGPLNLHMYTSQSLLPGVMATDRPFCI
GTCIEEDELEHETSSQPSMTTESSESSSRCMSGSGSSGSDSGCVSNILPETLSEEPGSPC
DTTCYSPSGSRRGSSATSPLDDKPRFTNSQYISAVSIQACYPNMSSAATFSKLFKCKLID
SIAIFCCLLYCTVSICLRGIEDL
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atggattgtgactcgctggacagctgcatacagagcaccctgtcagcgctgtacccccca
ttcgaggccactgcaggcacagtcctgtgccaggtctttgatgtagtggagaaaacctac
cgtggtgacggactgcgctatctcattgatttcctgctcccttccaagcacatccttcag
tgtattcagcaggatgcctgtgtccagtactgtgggaatctctttcgtcatgaaggctgg
cctttgtgcattcatgagaagattgtagtccatctggcttccctagactggcgatcccta
cagccaggagatttctacctgcaagcagtgccgtacttgaagaacaccccgcggatagtg
ttgaaatgcttagcgagggacgggcacaatgtagaggagctggaggtgccggagataacg
tacacttccattttcaccacggaatggctggattcaattaaccaggagcgcatgggaaca
gctctggaacactgcctcttatctactgacagcaacatctttcgggtgccttgggaggag
gtggtccgaccagagttcaggaacaaaccgagaatgatcgagaacgtgtcggggatcgct
agagcttcaggtgacgggacttgcccgaaagcattgcaggaaagccagcgcttggcaaac
agttcaggcccctcggcctccaaggggcagatgcaaaaaggacccgacatccggaggact
tccagtcagccctgcttcgatgctgtgaactggttagacctctcggataacatgtcagag
gagttcgaccaggaccttgaaggggagtatgtcgaactggcagacttccccttgcccagg
tttttcccacagaaaggctctttgactgaatctataagcctgaattataggaatcgaaat
aaaccaaagactttcttggaagcaaaaacatctgactgtcagaataatagcacttgtttg
caaaccttgatctgtacgaaccttatagaacagaacctgaacgcgccaagcgggttctgc
tcaaaatcaacaagcacatctattggcataagaactggcagcccagcagaagaagggaag
gtgaatggggcagttggggcgagagtagacagcactttaaatgatatggaaggtataaca
caggagattgttacagctgtgcctgattcaggttctctgaaagagccaggctgtatcagt
ggagttcctgatgtacagggatgtgaagagagcagcactctgaacaaagggctgcctagt
cacagcagcagctgtaatacacactcgccaagtcatggaattcagacagatttcagtgat
aacttattaagttgtgagagtaactctgatgatttacaggaatgcagagggattccagaa
agagaaaagggggtggtggttgttgttgttgagagtggtaatagtcgtccattaatcaca
acagacatgatgcacagcctaagagacacccatgacagagcctgtgatgagaatgacagc
gcactgatcaatgcctctcctgcttctttcactgaacaatcccagcaacaagcgcataca
caaagggagtacagcagcgattgtggccagttacttacccagagcgttgatccccagcac
aaagccaacccaatacccgagcacattaatcccttgtgtgagccctcagatgtgagcacc
gcagcagctagcccattgttgtttagcgcagaccgtgctgtgtcatcccagaagacacat
ggcgatgagctggaaccgggtctctcccattttaaaagcacttcaaaggaacaggtaggc
tgttcagctgaagtgcaggaccgagactgtgtcaatggacgtgtttgtaatggggaggaa
aggccacaggaggctgatctggtaagcaaggactcagctagtgtagaatccacagagacc
gaagaacctaatggcaatgctgacagggcaggacacaaaggggtcatgcacggacattcc
acacagaccacctcacattcacagctggctttatcacattcgggaacacctgacgaggat
ggagtctcgcctgcaagcacaggtgatagagacgcgaaggaaataggctgcccattgcag
gaagcgagttgcagggaggcttccgatcaggtagaaacagagcacaaaccaagcacagtt
acaggtgaggacagaagtatggaatgcgcaactgagagctcagaaatcccttttagtaac
agtgcggtcgatagagaatcggcaggattgcattccgtttcagatctgacaagttcggaa
cgtcccgctgggttacacatagaaaagaatggcgatgagagctgcagcgataagttggct
aatacaatggcattggaggatggccgttcattaccagccacagcagcacagcaccagaga
ctggaggatgctgtgtgtatgggtggaactggtttctctgagacacttgcacagggcagg
gaggaacaaagaaacaagcctgaaatgactctgaaagtaattcccagctctgtaggtggg
gatcaggatacttcaatggaatcacaccagaaaggtgtggaagaacagaaggagcagggc
gctgaggctcctgtgtctcctgccaggcagctctgtgaagctgtgagccgggaggagaga
gtggtccagaagcaccaggagtctctctcttttgttcccctctcttcaaagctgcagact
gtaccgacccaggcgctggatatcaaccctgctgtgctggactcgggagtggtctgtttg
cctggtacaagagacagatgcgggcgtgcccttgtgattgtcacaaccaggaacacgatt
tggttaaaccccaattgcaacagcgcccagcttgtacggcttcttgtctatttctacaca
attctcaggaaggcggtccgaaccctgggtctgactgttctggttgatgcccgtagatgc
tcgcctgttccagcactgttcaaagcatttaaccaactacaggaagctgtccctaattgt
attcacactgttctgctgcttgctgaaagagacctcacctttcgcatggaaaagcccaca
gctatgcagttcgaactcctcacatccctgaagtccctccacaagcacatggacgcctct
cagcttccactggagttcgatgggacctttccattctgccacagcgactgggtgtgcttt
cgcacgaaattggagcagctggtacagtgttgcaggtcagcgttcggcttcctccaggtc
accattgccagtctggagtctagtagagtacctgggacagcagaggaagcccaggtttta
ctcctgaggtacagagacctaatgaaaagagttcttgaagataaccgattggtcaggctg
cagctggagggaggagccaccctttccagactgaagaaagaggagtcctgcgtgacgctg
actgaagattacagagatgccatcgagatggttacgggtctgtataaccaggttgatgag
tcggtccatcgtcttgtcatgctgtccaataagtgcatgcaggagctggagtttgtaata
gagtttaaaactttggaagaagggttcaaggaggttagcggctggattgagcaggttgga
gaaagtcgactgaagaagctgagtgagctggatgattctctggagcagttacgttgcaca
cagactgacttcagagacttctactcgtcagcatatacgtactgcaagaatggtgagggg
ctcttgaagaagctggagccgtgggaagacgtctcctccgcagagctgcaggtctatgaa
gtgaaagtgcattcgttttgggagcagctgaaggacttctcactgagagtggaggatgcc
aaagggaagatcgacaagacagtcaagctgtatgagtttttcgacaaggcttacgagtgg
gcactggatggtatgcgccaccttgcctgcatcaccatggaggattgcagcatgccagag
aagtgcggtacggtcatcaagtgcctggatggataccggcggcagcacccagatataccc
gaggccaaattcacagaaatgaaggagctggcaggcgaattaaaaaatgacagaggactg
aagcagtggaagttcgcctggtctaagtgccaggaaaccaagcagatgtttgagaagaag
ctggaggccgctctgaggaccaggaggtccctgcccttggacagggcagtgtcgtcagac
gagggcagcgttaagagctgcagcggcgctaacccggcgagtaggcggcactcggagggc
tcagatcagaggctgcagcacgagcgcagccacagcatttcatattcctgcagcaggaaa
tcgacctccggcggctggaccagggacagactggcgacccattcacccggcagttactac
ggagccgggagcaatggtctggaggactccatggcagaatacgttctcaataggaccccc
accccaggccggcatggctttgatcacagggtgccagggcaggcaggtgctgctccggat
tctcacaaactgacccgcagcacttcttcagaggagactggcagagacaccctcacggca
ggactccagggcagggcttcctcctgctcctacagcctgggttcaggcagccagcagggg
aggaggctgctgaggaaaacccagagtttcgaggttgctcccagtgaggggctgcggtac
ggcacctgtcacagaactctcagcgagcctgccaggcacggcaacactggggtttttatc
aagggcctggaagtaagcagtacagagattgtagaccggacctgtacatccaggcagcag
gcaccccacagctggtctccttcccaggcagatgaacagaggagcagcaccccaatacct
gaagcgagggtcaagggcagcaaactgaggcacattgtggatgagatggtgaccacagag
caggagtttgtgcgctcgctgcactacatcattgataactacttccctgagatggagcgg
ccggacctgccccaggacctgcgggggaagcgcagcgtcatcttcggaaacctggagaag
ctcttcgatttccacagccagtacttcctcaaggagctggagagctgctgcaaccacccg
ctgagagtcagccattgcttcctgagacaccaagaccagtttgggatgtatgccttgtac
agtaagaacaaaccaaaatctgatgccctgctggctagtcatgggaatgccttctttagg
tataagcagttgcagctcggggataagatggatctggcctcctacctgttgaagccagtc
cagaggatgagtaaatacgccctgctcctgaaggacctgataaaggagtgcagcgaggca
caagagcaggagctcaactacctccgagcagctgccgaaatggtcaagttccagcttcgc
cacggcaacgacctgctggcgatggatgccatcagagattgcgatgtgaacctgaaggaa
caagggcagctggtacgacagggcgagtttactgtctgctacgggcggaagaagtgtcag
cgccatgtgttcttgtttgaggatcttgtgctcttcagcaaacccaaacgagttgtgggg
ggtctagatgtctacatctacaagcattcttttaagactgcagatgttggtttgacagag
aatagtggggacagcggtctgcgctttgagatctggttcaggagacgaaaatcaaaaaac
caaacgcacatccttcaagcaagtacacctgaggtcaagcgtgcctggactgctgatgta
gctaaaatactttggcagcaagctacaagaaataaagaagtacgaatgcaagagatggtg
tcaatgggcgtgggtaacaaaccctacctggacattaaacccagcgatgctgccatcaat
gacagagccattgactatattatgaaaggaagaggggccagaacgagggcgtccatcgcg
gtgtctttgtttgaccactccaaccccttcaagaggacgcaaacacccatttctggaagt
agtgccccttcagcctgcaatacaccttcctcttcattactggggcctcttaacctacac
atgtataccagccagtccttgctgcctggggtaatggccacagacaggcctttctgcatt
ggtacttgcatagaggaagatgagctggaacatgagactagcagccagccgtcgatgact
acagaaagttccgagtcttcctcccgttgtatgtcgggcagtggttccagtggatcagac
agtggctgtgtgtccaacattctccctgaaaccctgtcggaggagcctggatcaccgtgt
gatacaacatgctactccccgtctggatccagacgcggctcgagcgccacgtcgccactc
gacgacaagccgagattcacaaacagccagtacatttcagcagtaagtatacaggcatgc
tatcccaatatgtcatctgccgctacattttcaaagcttttcaaatgcaaactgatcgat
agtattgccatcttttgttgtttactttattgcaccgtttctatctgcctcagagggatt
gaagatttataa
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